Query= MSMg01no367_a03.b1 MSMg01no367_a03.b1 CHROMAT_FILE:
MSMg01no367_a03.b1 PHD_FILE: MSMg01no367_a03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:02 2005
(580 letters)
>mm_chr16_41655583_41656562
Length = 980
Score = 1098 bits (568), Expect = 0.0
Identities = 568/568 (100%)
Strand = Plus / Plus
Query: 13 gaattctactggaagcatcttgaaagtttttaccatatgtctgacactgtactaaaagtt 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gaattctactggaagcatcttgaaagtttttaccatatgtctgacactgtactaaaagtt 272
Query: 73 tgaacattgataatttgttcaccttcataatatttctatgttgtttgcagaactctttta 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 tgaacattgataatttgttcaccttcataatatttctatgttgtttgcagaactctttta 332
Query: 133 taaattgtgacctcacagaatcacttaattatccatatcaataattatatgcagaagcca 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 taaattgtgacctcacagaatcacttaattatccatatcaataattatatgcagaagcca 392
Query: 193 gaacctgagttctcaaatatattagataagaacatagggagcctcatctctagtcctagg 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gaacctgagttctcaaatatattagataagaacatagggagcctcatctctagtcctagg 452
Query: 253 tcagttacacattattttcttgatagcaagtgaatataatcaggctcagtgcttcatttc 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tcagttacacattattttcttgatagcaagtgaatataatcaggctcagtgcttcatttc 512
Query: 313 ttcccatgctcattattgtgagaattaagttttatggcatgtgtgttggcagttatagga 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ttcccatgctcattattgtgagaattaagttttatggcatgtgtgttggcagttatagga 572
Query: 373 gtttttgtagaggctatgtttttagtaaatgcttgtttttctcccattctgatggttctc 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gtttttgtagaggctatgtttttagtaaatgcttgtttttctcccattctgatggttctc 632
Query: 433 tgtcttaggagttctatgaaccgaccttgacttttgcaagccatgttacgtcctgctcaa 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tgtcttaggagttctatgaaccgaccttgacttttgcaagccatgttacgtcctgctcaa 692
Query: 493 tctgtgccttggtcccatgggccaaaaggtgcttgccctcacttaaggaggaaacacatg 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 tctgtgccttggtcccatgggccaaaaggtgcttgccctcacttaaggaggaaacacatg 752
Query: 553 ggcagcaccagatgattcctgagcagac 580
||||||||||||||||||||||||||||
Sbjct: 753 ggcagcaccagatgattcctgagcagac 780
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space: 552900
Effective search space used: 552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_a03.g1 MSMg01no367_a03.g1 CHROMAT_FILE:
MSMg01no367_a03.g1 PHD_FILE: MSMg01no367_a03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:02 2005
(500 letters)
>mm_chr16_41815366_41816264
Length = 899
Score = 951 bits (492), Expect = 0.0
Identities = 498/500 (99%), Gaps = 1/500 (0%)
Strand = Plus / Minus
Query: 1 accctgctctggtacctctctcagcctacctgcctctccgaggctgatttcttatttgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 accctgctctggtacctctctcagcctacctgcctctccgaggctgatttcttatttgtc 640
Query: 61 aatttgtaaaagactcccatgtacatctatggcacttggaacaccatatacaaactctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 aatttgtaaaagactcccatgtacatctatggcacttggaacaccatatacaaactctca 580
Query: 121 ttgagtcccccttctattccataagccgatcatctgatccttcatttaggcacaaagtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 ttgagtcccccttctattccataagccgatcatctgatccttcatttaggcacaaagtct 520
Query: 181 acatgtcatatcaggtgactgtctgcatttgaatctctacacatagtatagaaaccccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 acatgtcatatcaggtgactgtctgcatttgaatctctacacatagtatagaaaccccat 460
Query: 241 ctagcctcctccctttgactggggcaggtactagtgtctgtggctggccaggttcatctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ctagcctcctccctttgactggggcaggtactagtgtctgtggctggccaggttcatctg 400
Query: 301 cattcactcctggcctctccccagctcgagcgcagctcagcattacagttgtgccccatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 cattcactcctggcctctccccagctcgagcgcagctcagcattacagttgtgccccatc 340
Query: 361 attacagcctgccctccttgtgttaaatcaatagtttatgacatgtacaagggaaagctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 attacagcctgccctccttgtgttaaatcaatagtttatgacatgtacaagggaaagctg 280
Query: 421 taaatttaattttgtcccctgcagtgcaattcctattttgtcttctggcaacataatgaa 480
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 279 taaatttaattttgtcccctgcagtgcaattcctattttgttttctggcaacataatgaa 220
Query: 481 tgtgttttgccctccagacc 500
||||||| ||||||||||||
Sbjct: 219 tgtgttt-gccctccagacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 899
Length adjustment: 10
Effective length of query: 490
Effective length of database: 889
Effective search space: 435610
Effective search space used: 435610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
