Query= MSMg01no370_b10.b1 MSMg01no370_b10.b1 CHROMAT_FILE:
MSMg01no370_b10.b1 PHD_FILE: MSMg01no370_b10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:01 2005
(404 letters)
>mm_chr16_75970421_75971225
Length = 805
Score = 737 bits (381), Expect = 0.0
Identities = 396/401 (98%), Gaps = 1/401 (0%)
Strand = Plus / Plus
Query: 5 gaattcttgtgttaatcaagtccattttcaaagggctaaatcaggaggcccagcagacat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttgtgttaatcaagtccattttcaaagggctaaatcaggaggcccagcagacat 264
Query: 65 gtttatgtcagatgtgaacacaaggaggcttgtgcttcaccctaaagggtgccaaagatc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtttatgtcagatgtgaacacaaggaggcttgtgcttcaccctaaagggtgccaaagatc 324
Query: 125 ttgaagcggttaacagaggtctcgtcagaaatactccccaagtagtaatttaacagaccc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgaagcggttaacagaggtctcgtcagaaatactccccaagtagtaatttaacagaccc 384
Query: 185 ggagttgcttggcaaaaaggttgctgggcatggtgctttgcataatcataatggtttatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggagttgcttggcaaaaaggttgctgggcatggtgctttgcataatcataatggtttatt 444
Query: 245 atctcgaggcaacatttgatttttttt-ctttttcatttgtatcccaattcacaagaacc 303
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 445 atctcgatgcaacatttgatttttttttctttttcatttgtatcccaattcacaagaacc 504
Query: 304 tgagctcagcaattaaaacaacaacaaaaacaaaaacaaaaccagagagcatcaaaatac 363
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 505 tgagctcagcaattaaaacaacaacaaaaacaaaaacaaaactagagagcatcaaaatag 564
Query: 364 aaatcaggtccccggcgatctcagtacaagacactactggc 404
|||||||||||||||| ||||||||||||||||||||||||
Sbjct: 565 aaatcaggtccccggcaatctcagtacaagacactactggc 605
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 805
Length adjustment: 9
Effective length of query: 395
Effective length of database: 796
Effective search space: 314420
Effective search space used: 314420
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_b10.g1 MSMg01no370_b10.g1 CHROMAT_FILE:
MSMg01no370_b10.g1 PHD_FILE: MSMg01no370_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:01 2005
(178 letters)
>mm_chr16_76164236_76164813
Length = 578
Score = 248 bits (128), Expect = 2e-70
Identities = 172/204 (84%), Gaps = 29/204 (14%)
Strand = Plus / Minus
Query: 1 acagtcatggataagaccgggctgttgaggaaaggccggggcggg--------------- 45
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 acagtcatggataagaccgggctgttgaggaaaggccggggcgggtgtgtgtgtgtgtgt 395
Query: 46 --------gggt-t-----agagtcaattgttgaggcctacgcaaactacatgagcttcc 91
| || | |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 394 gtgtgtgtgtgtgtgagagagagtcaattgttgagccctacgcaaactacatgagcttcc 335
Query: 92 ctaccttaaagagaatgtgacatcctcagaattgcacttctgaatgggtaggtggaaggt 151
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ctaccttaaagagaacgtgacatcctcagaattgcacttctgaatgggtaggtggaaggt 275
Query: 152 ggccggaaggtggaggggtgcatc 175
||||||||||||||||||||||||
Sbjct: 274 ggccggaaggtggaggggtgcatc 251
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 178
Length of database: 578
Length adjustment: 8
Effective length of query: 170
Effective length of database: 570
Effective search space: 96900
Effective search space used: 96900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
