Query= MSMg01no370_p08.b1 MSMg01no370_p08.b1 CHROMAT_FILE:
MSMg01no370_p08.b1 PHD_FILE: MSMg01no370_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:10 2005
(505 letters)
>mm_chr16_22916802_22917706
Length = 905
Score = 886 bits (458), Expect = 0.0
Identities = 490/504 (97%), Gaps = 9/504 (1%)
Strand = Plus / Plus
Query: 6 gaattcaaagtctttcc--ggtctacatagtaagtttcaggatagccaggcctatgtaga 63
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcaaagtca--ccctggtctacatagtaagtttcaggatagccaggcctatgtaga 264
Query: 64 aagaccctatctcaaaaacaaaaatt--aaaaaaaaaaagactaagattgaaaagccagg 121
|||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 265 aagaccctatctcaaaaacaaaaattttaaaaaaaa---gactaagattgaaaagccagg 321
Query: 122 ttcagctctgggtgggcttgttgcactgtagtctccgtgcttgtaggccttctcagccag 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttcagctctgggtgggcttgttgcactgtagtctccgtgcttgtaggccttctcagccag 381
Query: 182 cccaggaggaaagaatcattatctccgatggcccgagccaagttctgaattctcttgctg 241
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 382 cccaggaggaaagaatcattatctccgatggcccgagtcaagttctgaattctcttgctg 441
Query: 242 cctctagaaccaaccccaaagcccagagtcccctcattctccctcacacattcttcctca 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cctctagaaccaaccccaaagcccagagtcccctcattctccctcacacattcttcctca 501
Query: 302 ttgagaaccttccttcccagcagtttccccaacatcacaatggatgcaaataccttttta 361
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 502 ttgagaaccttccttcccagcagtttccccaacatcacaatgcatgcaaataccttttta 561
Query: 362 gaatttgccataccctttccaccctggaaaagcaaaatattccattcttaccattagtct 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gaatttgccataccctttccaccctggaaaagcaaaatattccattcttaccattagtct 621
Query: 422 tttaggctgttgtgtgatcaaagaactgcattcaagaataactgttctgaagtgtgagtt 481
||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 622 tttaggctgttgtgtgatcaaagaactgcattcaagaataactgttccgaagggtgagtt 681
Query: 482 gtgggtttatttcttctgctgtgt 505
||||||||||||||||||||||||
Sbjct: 682 gtgggtttatttcttctgctgtgt 705
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space: 443025
Effective search space used: 443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_p08.g1 MSMg01no370_p08.g1 CHROMAT_FILE:
MSMg01no370_p08.g1 PHD_FILE: MSMg01no370_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:10 2005
(387 letters)
>mm_chr16_23148078_23148864
Length = 787
Score = 621 bits (321), Expect = 0.0
Identities = 370/389 (95%), Gaps = 10/389 (2%)
Strand = Plus / Minus
Query: 1 aacccctggatctcccataaaaagcaagatgtggtggcgatcacagtctcctgaggctga 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 415 aacccctggatctcccataaaaagcaagatgcggtggcgatcacagtctcctgaggctga 356
Query: 61 cggtgggtggacgagcagaagaaacaagagaggaggagagggacgactcccaaaagttac 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 355 cggtgggtggacgagcagaagaaacaagagaggaggaaagggacgactcccaaaagttac 296
Query: 121 cctctcacctccatgtgcctgccatagaatgagcgtgtctgcacacattagactcttgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 cctctcacctccatgtgcctgccatagaatgagcgtgtctgcacacattagactcttgtg 236
Query: 181 tgtgcttgcacattctctctcaagaaagcactaat-ca-acacacacacacacacacacg 238
||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 235 tgtgcttgcacattctctctcaagaaagcactaatacacacacacacacacacacacaca 176
Query: 239 cgcactcatgcacgcatgcacgcatgcacgcatgcacgcacgcacgcacttgcacaaata 298
| ||| || ||| || |||||||||||||| | |||||||||||||||||||||||
Sbjct: 175 cacacaca--cacaca--cacgcatgcacgca---a-gcacgcacgcacttgcacaaata 124
Query: 299 aaattttaagtgcttgggagatggctgtgttgattactgctttctgcagatgcatgagaa 358
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 123 aaattttaagtgcttgggagatggctgtgttgattagtgctttctgcagatgcatgagga 64
Query: 359 cctgaatttatatccctagaattcatgtc 387
|||||||||| ||||||||||||||||||
Sbjct: 63 cctgaatttagatccctagaattcatgtc 35
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 787
Length adjustment: 9
Effective length of query: 378
Effective length of database: 778
Effective search space: 294084
Effective search space used: 294084
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
