Query= MSMg01no371_b05.b1 MSMg01no371_b05.b1 CHROMAT_FILE:
MSMg01no371_b05.b1 PHD_FILE: MSMg01no371_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:20 2005
(475 letters)
>mm_chr16_6699446_6700320
Length = 875
Score = 919 bits (475), Expect = 0.0
Identities = 475/475 (100%)
Strand = Plus / Minus
Query: 1 agatctaggaaagactcattccaaggtgcaggagacactgtctgctgcaaaatagagaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 agatctaggaaagactcattccaaggtgcaggagacactgtctgctgcaaaatagagaac 616
Query: 61 agggtaaaaggaaccccacaacccacccatgcaggtatgccctcactcaccccactgaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 agggtaaaaggaaccccacaacccacccatgcaggtatgccctcactcaccccactgaac 556
Query: 121 tcccttccagaaagccttggaaattttttgaatatttattttttttctgtcacatgacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tcccttccagaaagccttggaaattttttgaatatttattttttttctgtcacatgacca 496
Query: 181 agttacaacttgtctactgatggcagagctgcatcgtgtttcctttgtgcctgtgttttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 agttacaacttgtctactgatggcagagctgcatcgtgtttcctttgtgcctgtgttttg 436
Query: 241 ttttttgctttgttgcactaaatctttaatttggactgagttatgagttttgaataattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ttttttgctttgttgcactaaatctttaatttggactgagttatgagttttgaataattg 376
Query: 301 atggtgatgatttggaccgcttcctcctccagctttgtcacaagctgaaatgttaggagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 atggtgatgatttggaccgcttcctcctccagctttgtcacaagctgaaatgttaggagc 316
Query: 361 tgagatgtgctcaaagccacgtgctccaggctttacttccaaatcttttcctgacatgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tgagatgtgctcaaagccacgtgctccaggctttacttccaaatcttttcctgacatgcc 256
Query: 421 agcctccacaccacatcttctcacaagctttattcagaaatgcaacagggagcac 475
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 agcctccacaccacatcttctcacaagctttattcagaaatgcaacagggagcac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no371_b05.g1 MSMg01no371_b05.g1 CHROMAT_FILE:
MSMg01no371_b05.g1 PHD_FILE: MSMg01no371_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:21 2005
(519 letters)
>mm_chr16_6542198_6543116
Length = 919
Score = 975 bits (504), Expect = 0.0
Identities = 513/517 (99%), Gaps = 2/517 (0%)
Strand = Plus / Plus
Query: 5 gaattcttggaggggggaagttactctcttcaattgtgtacccactgccaagcccacctg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttggaggggggaagttactctcttcaattgtgtacccactgccaagcccacctg 264
Query: 65 ccttgagcaaataactccaaaaccatggtcacacagatggtcctggtaaggtcagcagct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccttgagcaaataactccaaaaccatggtcacacagatggtcctggtaaggtcagcagct 324
Query: 125 aacaagaccaagtaaaacaaaaatagaggtaagcatgagaaagagatttgtaaaaagaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aacaagaccaagtaaaacaaaaatagaggtaagcatgagaaagagatttgtaaaaagaag 384
Query: 185 ggattacataaaggtgtaagagaccaggtatgagggggtgagaacggctactcttgacaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggattacataaaggtgtaagagaccaggtatgagggggtgagaacggctactcttgacaa 444
Query: 245 tgttgaaattgtcaaggaataattttaattaatgtaaaataagcagaaatcactagaaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgttgaaattgtcaaggaataattttaattaatgtaaaataagcagaaatcactagaaga 504
Query: 305 actacacattgaaacttgttctctgatgtccatttatacataccagctgtacacacacac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 actacacattgaaacttgttctctgatgtccatttatacataccagctgtacacacacac 564
Query: 365 agacacacacacatgcgcacgcacacacacacacacacacacacacacacacacacacac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agacacacacacatgcgcacgcacacacacacacacacacacacacacacacacacacac 624
Query: 425 --tcatactgtagctctcttatgtttctcccatgcagggttttcttgtgtccaccatgtt 482
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 625 actcatactgtagctctcttatgtttctcccatgcagtgttttcttgtgtccaccatgtt 684
Query: 483 ttatgatgcagattantatctgtggctgtattgagag 519
||||||||||||||| |||||||||||||||||||||
Sbjct: 685 ttatgatgcagattagtatctgtggctgtattgagag 721
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 80
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
