Query= MSMg01no373_d14.b1 MSMg01no373_d14.b1 CHROMAT_FILE:
MSMg01no373_d14.b1 PHD_FILE: MSMg01no373_d14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:08 2005
(629 letters)
>mm_chr16_46752382_46753409
Length = 1028
Score = 1149 bits (594), Expect = 0.0
Identities = 614/622 (98%), Gaps = 4/622 (0%)
Strand = Plus / Minus
Query: 8 gaattctgagagttatcaactattctcctaattctccagagctcacttgccagggggcag 67
|||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 986 gaattctgagagctatgaactattctcctaattctccagagctcgcttgccagggggcag 927
Query: 68 agggaacctagaaacag---ttttttttttaaagtaaaacagaacaattctcagatttca 124
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 agggaacctagaaacagtttttttttttttaaagtaaaacagaacaattctcagatttca 867
Query: 125 tatgtgaatgatagtaatccttctccactctagttatgctggaaaactttcatgaagaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 tatgtgaatgatagtaatccttctccactctagttatgctggaaaactttcatgaagaca 807
Query: 185 ttagacatagtacccagaaagctcttatttcaacagtgaagtattgggtctagagaaaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 ttagacatagtacccagaaagctcttatttcaacagtgaagtattgggtctagagaaaat 747
Query: 245 gctatactggtcaactgagtgcattttgaaagccaaagtagagtagcaaactttgaagag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 gctatactggtcaactgagtgcattttgaaagccaaagtagagtagcaaactttgaagag 687
Query: 305 gctcaatgagtctcttcttcagtcccccataacagtgcacataccctaccctgacagcct 364
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gctcaatgagtctctt-ttcagtcccccataacagtgcacataccctaccctgacagcct 628
Query: 365 tgagtgaaatctttgagctcttcatggaattatgactgcatgtttcttcttgagtgtcaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tgagtgaaatctttgagctcttcatggaattatgactgcatgtttcttcttgagtgtcaa 568
Query: 425 accattggtctgcaggagcaaggcacatgaaaatcaaacaagcccagtgtgcttttttat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 accattggtctgcaggagcaaggcacatgaaaatcaaacaagcccagtgtgcttttttat 508
Query: 485 tctttcaaaggtaatcttttctgcaggttttcactcctttatgccaccaattgtatgtat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tctttcaaaggtaatcttttctgcaggttttcactcctttatgccaccaattgtatgtat 448
Query: 545 gttttgtttggaggtgtgcattcatgtgtgcatgtgtgtatgcgtgcattcctgcatgtg 604
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 447 gttttgtttggaggtgtgcattcatgtgtgcatgtgtgtatgtgtgcattcctgcatgtg 388
Query: 605 tgtgtgtgtgtgtgtgtgtgtg 626
||||||||||||||||||||||
Sbjct: 387 tgtgtgtgtgtgtgtgtgtgtg 366
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1028
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1018
Effective search space: 630142
Effective search space used: 630142
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_d14.g1 MSMg01no373_d14.g1 CHROMAT_FILE:
MSMg01no373_d14.g1 PHD_FILE: MSMg01no373_d14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:08 2005
(326 letters)
>mm_chr16_46580949_46581674
Length = 726
Score = 601 bits (311), Expect = e-176
Identities = 322/326 (98%)
Strand = Plus / Plus
Query: 1 gttagaaagaagaataagtctcacaacggctggcaaacaagtaaagaaaaatggcccctt 60
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 gttagaaagaagaataagtttcacaactgctggcaaacaagtaaagaaaaatggcccctt 260
Query: 61 aaatatagcaaatggcagtgcactgctttgccacatttaaacttagactatagttgatat 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 aaatatagcaaatggcagtgcactgctttgcctcatttaaacttagactatagttgatat 320
Query: 121 taatatacattcaaactgctaaaaattactcccagcggcagctgtgtaaagtcacttttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taatatacattcaaactgctaaaaattactcccagcggcagctgtgtaaagtcacttttt 380
Query: 181 ttttcacacggttgcttgtaatatgtgaagtcttagagtaatgcctttaaatagttgaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttcacacggttgcttgtaatatgtgaagtcttagagtaatgcctttaaatagttgaag 440
Query: 241 aagagaaaaccgaaggcgaggtgccaatttctaaattaggaaccatcacctccgcgagcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagagaaaaccgaaggcgaggtgccaatttctaaattaggaaccatcacctccgcgagcg 500
Query: 301 tattgngtgaggagcgctcctgtgag 326
||||| ||||||||||||||||||||
Sbjct: 501 tattgggtgaggagcgctcctgtgag 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
