TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATCCGCG
GAATTCTCAACAGAGGAATCTTGAATGGGAGAGAAGCACTTAAAGAAATG
TTCAACATCCTTAGTCATCAGAGAAATGCAAATCAAAATGACCTGGAGAT
TTCACCTTATACCCATCAGAATGGCTAAGATCAAAATCTCAAGTGACAAC
ACCTGCTGGCAAGGATTTGGAGAAAGAAGGATACTCCTTCATTGCTGGTA
GGATTGCAAACTGGTACAACCAATCAGGAAATCAAGCTGGCCTCTTCCTC
AGTGAGTTGGAAATACATTTACCTGAAGATCCAGCTATACCACATCTCAA
CTCAGCTATATTTAAGGGCTTGGCCACTGGGTCTTTGACCATGCTCCAAT
GAGTTTAAGGGCAACATAAATTGGACCTGGAGTACATTTTATCTTTTTTT
AAATATCTTTTTTCAGGGTGGGGTGGGGAACAAAAATGTGAAAGCAGACC
TGGGAGGAATGGTATGTGAGTATGATCAGGGTTCAGTTTATGAAATTTCC
AATTAATTAATAAAAATATTATGCCTGATGACTCTGCTAAGTAGGTAAAG
GAGTTTGCTGGCAAATCTAAGAACCCGAGTTTGATTCCTAAGATCCACAT
TGTATAAGAAAAACAGACTCACTCAAGTTGCCCTCTGGGCTCTGGCATCA
CAGTGCATTGCATTGTGATATGTACAGGTACCCACACACCCCCCTCCCCC
TTCCGAAACCACCACCCCCTCTAAAAN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXACTCGGGACAACCAGAATCTTCTGAGGCAAAAGCTTTATTGCTTC
TTCTCAGGAAGACCCCAAACCCAGAAAATGGAGCTGCTTATATAGCCCGC
AGCGTGACGTTTCAGCACCTGATATGGCGTGACAGCACCTGATTCATTGC
TCGCCCATCACCCCACTACTATGCCCCGAGAATGGGCAGTGACTAAGAGT
GAGTTCACTCTAGCGCTTGCATACAAGGCTTGTTTACTAGTTAGGCACAG
CGGAGGCCAGCGCCATCTTATAATGGCGATTGCTCACAGAAAGCACGGCT
CTCCACAGCTATTGCTCGCAGCACGCACAGCTCTCCACAACTACATATTC
AAATAATTGTATATATGATCCTATTTACAATTTTATGTAAATATATGGAA
TTGTTTTGTTGTTTTGATATTAATAGATGTGATACATTCATCTATATATA
TTAACTAGACTGAAGTATTGTTTACGTTTTATATAACAATGGATATATGT
ATGTGNATGTGTATGTGTATGTGGATGTGNATNNNNNNNNTTTTTTTTTN
TTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTNNTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTT

Query= MSMg01no374_a09.g1 MSMg01no374_a09.g1 CHROMAT_FILE:
MSMg01no374_a09.g1 PHD_FILE: MSMg01no374_a09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:07 2005
         (499 letters)



>mm_chr16_71299078_71299974
          Length = 897

 Score =  617 bits (319), Expect = 0.0
 Identities = 369/407 (90%), Gaps = 34/407 (8%)
 Strand = Plus / Minus

                                                                       
Query: 93  cgcagcgtgacgtttcagcacctgatatggcgtgacagcacctgattcattgctcgccca 152
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 897 cgcagcgtgacgtttcagcacctgatatggcgtgacagcacctgattcattgcttgccca 838

                                                                       
Query: 153 tcaccccactactatgccccgagaatgggcagtgactaagagtgagttcactctagcgct 212
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 tcaccccactactatgccccgagaatgggcagtgactaagagtgagttcactctagcgct 778

                                                                       
Query: 213 tgcatacaaggcttgtttactagttaggcacagcggaggccagcgccatcttataatggc 272
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 tgcatacaaggcttgtttactagttaggcacagcggaggccagcgccatcttataatggc 718

                                                                       
Query: 273 gattgctcacagaaagcacggctctccacagctattgctcgcagcacgcacagctctcca 332
           |||||||||||||||| |||||||||||||                              
Sbjct: 717 gattgctcacagaaaggacggctctccaca------------------------------ 688

                                                                       
Query: 333 caactacatattcaaataattgtatatatgatcctatttacaattttatgtaaatatatg 392
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 --actacatattcaaataattgtatatatgatcctatttacaattttatgtaaatatatg 630

                                                                       
Query: 393 gaattgttttgttgttttgatattaatagatgtgatacattcatctatatatattaacta 452
           |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||
Sbjct: 629 gaattgttttgttgttttgatattaatagatgt--tacattcatctatatatattaacta 572

                                                          
Query: 453 gactgaagtattgtttacgttttatataacaatggatatatgtatgt 499
           ||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 571 gactgaagtattgtttatgttttatataactatggatatatgtatgt 525


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 897
Length adjustment: 10
Effective length of query: 489
Effective length of database: 887
Effective search space:   433743
Effective search space used:   433743
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)