Query= MSMg01no374_m15.b1 MSMg01no374_m15.b1 CHROMAT_FILE:
MSMg01no374_m15.b1 PHD_FILE: MSMg01no374_m15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:08 2005
(542 letters)
>mm_chr16_11891203_11892144
Length = 942
Score = 524 bits (271), Expect = e-153
Identities = 310/323 (95%), Gaps = 2/323 (0%)
Strand = Plus / Minus
Query: 4 ggaattcagtttcttcccgtaaaactctgctgtttgagggataaaggagatgggtgctct 63
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ggaattcagtttcatcctgtaaaactctgctgtttgagggataaaggagatgggtgctct 269
Query: 64 cagagcagccatctttccaggacaaagtttatgtagccccacacctttaattcaacctgt 123
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 cagagcagctatccttccaggacaaagtttatgtagccccacacctttaattcaacctgt 209
Query: 124 tctttaataactggaagaaacaatgacttttccttaatatctcttaatatcaatggactc 183
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tctttaataactggaagcaacaatgacttttccttaatatctcttaatatcaatggactc 149
Query: 184 aaatccccaataaaaagacataggctaacagactggtta-tgtaaacaggacccaacgtt 242
|||||||||||||||||||||||||||||| |||||||| | ||||||||||||||| ||
Sbjct: 148 aaatccccaataaaaagacataggctaacaaactggttact-taaacaggacccaacatt 90
Query: 243 ttgctgcacacaggaaacccacctcagtgataacgactgacactacctcagagtaaaagg 302
|||||||| |||||||||||||||||| ||||| ||| ||||||||||||||||||||||
Sbjct: 89 ttgctgcatacaggaaacccacctcagggataaagacagacactacctcagagtaaaagg 30
Query: 303 ctggaaaacaagtttccaagcaa 325
|||||||||||||||||||||||
Sbjct: 29 ctggaaaacaagtttccaagcaa 7
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 942
Length adjustment: 10
Effective length of query: 532
Effective length of database: 932
Effective search space: 495824
Effective search space used: 495824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_m15.g1 MSMg01no374_m15.g1 CHROMAT_FILE:
MSMg01no374_m15.g1 PHD_FILE: MSMg01no374_m15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:08 2005
(458 letters)
>mm_chr16_11678428_11679285
Length = 858
Score = 835 bits (432), Expect = 0.0
Identities = 454/466 (97%), Gaps = 8/466 (1%)
Strand = Plus / Plus
Query: 1 acttacctatactgttgtctgtgttctgtatgcattgcagctagccatactgttactgat 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 193 acttacctatactgttgtctgtgttctgtacgcattgcagctagccatactgttactgat 252
Query: 61 cactttgtatgcgtgtgcaagcacatttttaaatgtgaatatgtatgcatctttctctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cactttgtatgcgtgtgcaagcacatttttaaatgtgaatatgtatgcatctttctctct 312
Query: 121 tgctctccactttgtatttagagatggggtctcatcctgaatccagagctcatttgtttg 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 313 tgctctccactttgtatttagagatggggtctcatcttgaatccagagctcatttgtttg 372
Query: 181 gctagattgtttggttagtgagccctgaagatcttgctcagtgctagatggacacacacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gctagattgtttggttagtgagccctgaagatcttgctcagtgctagatggacacacacc 432
Query: 241 accacatccacttttccatgggtgctgccgagcacatcccaggtcctcatgcttgcacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 accacatccacttttccatgggtgctgccgagcacatcccaggtcctcatgcttgcacag 492
Query: 301 tggtcactttactctccagccacacattgg--------tgccacagaggagctgtgcagg 352
||| |||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 493 tgggcactttactctccagccacacattggccacacagttccacagaggagctgtgcagg 552
Query: 353 agctaacgtggaagaatcgaggggtgcctcactcttggagagcagtggtagtgattttag 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 agctaacgtggaagaatcgaggggtgcctcactcttggagagcagtggtagtgattttag 612
Query: 413 gtcgtcctgggggagtgttccatgtactgcctgtaatgctgagttg 458
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gtcgtcctgggggagtgttccatgtactgcctgtaatgctgagttg 658
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
