Query= MSMg01no375_a03.b1 MSMg01no375_a03.b1 CHROMAT_FILE:
MSMg01no375_a03.b1 PHD_FILE: MSMg01no375_a03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:27 2005
(349 letters)
>mm_chr16_9213727_9214475
Length = 749
Score = 574 bits (297), Expect = e-168
Identities = 333/355 (93%), Gaps = 17/355 (4%)
Strand = Plus / Plus
Query: 1 atacgagcttcatgagaccctgcttctaccacaaacaaacaaacaaacaaacaaacaaac 60
|||||||||||||||||||||| ||| |||||||| ||||||||||||||||||
Sbjct: 208 atacgagcttcatgagaccctgtttccaccacaaa-------acaaacaaacaaacaaac 260
Query: 61 aaacatagcctggacacaatacatgtgtccctctgaactgtgagtcaaactaaattcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaacatagcctggacacaatacatgtgtccctctgaactgtgagtcaaactaaattcttt 320
Query: 121 ggggaaaaacatccacaaaacccaaccaaccaatacaagagaaagagtgcaccaacccag 180
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggaaaaaacatctacaaaacccaaccaaccaatacaagagaaagagtgcaccaacccag 380
Query: 181 ccatgctctcgtgtgcctttctaaaggctaaccctgttgctctctaagtgactattatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccatgctctcgtgtgcctttctaaaggctaaccctgttgctctctaagtgactattatca 440
Query: 241 tttatattcatttaaaaagacttaaaattttaatttatcttctctctctctctctctctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttatattcatttaaaaagacttaaaattttaatttatcttctctctctctctctctctc 500
Query: 301 tctctctctgt----------gtgtgtgtgtgtgtgtgtgtgtgtctgtatgtgt 345
||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 501 tctctctctctctctctctctgtgtgtgtgtgtgtgtgtgtgtgtctgtatgtgt 555
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no375_a03.g1 MSMg01no375_a03.g1 CHROMAT_FILE:
MSMg01no375_a03.g1 PHD_FILE: MSMg01no375_a03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:27 2005
(379 letters)
>mm_chr16_9384188_9384965
Length = 778
Score = 725 bits (375), Expect = 0.0
Identities = 378/379 (99%), Gaps = 1/379 (0%)
Strand = Plus / Minus
Query: 1 caagatgcctctgcaatgcatttttctccaaagacacaaaagaaagttttgtggtccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 caagatgcctctgcaatgcatttttctccaaagacacaaaagaaagttttgtggtccttt 519
Query: 61 tggaatgagaagctacttttaaaaaatgtttaagaggaacttatatgcataatcctgaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tggaatgagaagctacttttaaaaaatgtttaagaggaacttatatgcataatcctgaca 459
Query: 121 agtttaatttagacgtggctatacaaatatattggtgcgtagagaaaagagctatctagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 agtttaatttagacgtggctatacaaatatattggtgcgtagagaaaagagctatctagg 399
Query: 181 taactttatgttctgaatttttttttcctatcctcccatcccaaacttagtgtcttagaa 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 taactttatgttctgaa-ttttttttcctatcctcccatcccaaacttagtgtcttagaa 340
Query: 241 taatggtttctaaacattcattaccttataactgaatagcttttgttttttctttgattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 taatggtttctaaacattcattaccttataactgaatagcttttgttttttctttgattg 280
Query: 301 tttttttactaattacatttgttctttgatatttttatgcatgtcaaccttccctttgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tttttttactaattacatttgttctttgatatttttatgcatgtcaaccttccctttgta 220
Query: 361 agactctgatgaaccttag 379
|||||||||||||||||||
Sbjct: 219 agactctgatgaaccttag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 778
Length adjustment: 9
Effective length of query: 370
Effective length of database: 769
Effective search space: 284530
Effective search space used: 284530
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
