Query= MSMg01no376_c16.b1 MSMg01no376_c16.b1 CHROMAT_FILE:
MSMg01no376_c16.b1 PHD_FILE: MSMg01no376_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:00 2005
(495 letters)
>mm_chr16_45992702_45993596
Length = 895
Score = 884 bits (457), Expect = 0.0
Identities = 484/495 (97%), Gaps = 4/495 (0%)
Strand = Plus / Plus
Query: 5 gaattcaacaagatctggttatcacagttccagcactgataactagattcttgtttttgg 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaattcaacaagagctggttatcacagttccagcactgataactagattcttgtttttgg 260
Query: 65 caacctgtttagtttctttgtgcctcaatttctcaatctgaaaattggggagccatgtac 124
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caacatgtttagtttctttgtgcctcaatttctcaatctgaaaattggggagccatgtac 320
Query: 125 ctat----atccctggtttaggcttatggaagacaaagaaaccaatcctagaagcttagt 180
|||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 321 ctatctatatccctggtttaggcttatggaaggcaaagaaaccaatgctagaagcttagt 380
Query: 181 taatcttagtgtgactaagtgggttatccttctgcttctgttggtattttcatactcctt 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 taatcttagtgtgactaagtgggttatccttctgcttctgttagtattttcatactcctt 440
Query: 241 atctgaagtgatgggcatcttaagactttgcaatgcagtcattagcacttgtcttacctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atctgaagtgatgggcatcttaagactttgcaatgcagtcattagcacttgtcttacctt 500
Query: 301 gagcatcaagacttgctttctgcatgtcgtagtttcccttaagacaactagaaacaccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagcatcaagacttgctttctgcatgtcgtagtttcccttaagacaactagaaacaccaa 560
Query: 361 tcctccatgcctaaattctccgtcagtatttcaaattctcctgtctctctccttctcctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcctccatgcctaaattctccgtcagtatttcaaattctcctgtctctctccttctcctc 620
Query: 421 tgtccctccctactacttttcctactgatgcccattttgaaccagacaccaagtgtatac 480
||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 621 tgtccctccctactacttttcctaccgatgcccattttgaaccagacaccaagtatatac 680
Query: 481 tgagatgacaccaga 495
|||||||||||||||
Sbjct: 681 tgagatgacaccaga 695
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space: 429225
Effective search space used: 429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_c16.g1 MSMg01no376_c16.g1 CHROMAT_FILE:
MSMg01no376_c16.g1 PHD_FILE: MSMg01no376_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:00 2005
(483 letters)
>mm_chr16_46139276_46140158
Length = 883
Score = 919 bits (475), Expect = 0.0
Identities = 481/483 (99%)
Strand = Plus / Minus
Query: 1 attccccagagattagtgaaaacttctctgtattctttaaaatgttggatggccacagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 attccccagagattagtgaaaacttctctgtattctttaaaatgttggatggccacagca 624
Query: 61 cagggagtcataactttgcattattttctttaatgcatgacagaaatgccaattttgaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 cagggagtcataactttgcattattttctttaatgcatgacagaaatgccaattttgaca 564
Query: 121 ccacattaaacattattcactcttaatctatgaaaatttctttaaaacaaactctcatta 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 563 ccacattaaacattattcactcttagtctatgaaaatttctttaaaacaaactctcatta 504
Query: 181 tgaagacttgaaatgttaaaaagaatcgcataaggattttattgacacaattaacattca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tgaagacttgaaatgttaaaaagaatcgcataaggattttattgacacaattaacattca 444
Query: 241 taaaggatgagaaaacagcttgcaatgtctctgaggtcacacagtaggaactttagcttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 taaaggatgagaaaacagcttgcaatgtctctgaggtcacacagtaggaactttagcttg 384
Query: 301 tcaaacctcagcttacactttgcacatagcaaatactttacacatctgcggaccattctt 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 383 tcaaacctcagcttacactttgcacatggcaaatactttacacatctgcggaccattctt 324
Query: 361 ttgagtaatggaaatgcctcatctggaatcttctctgttagatgagccagctttgcagtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttgagtaatggaaatgcctcatctggaatcttctctgttagatgagccagctttgcagtg 264
Query: 421 cacaggggcccaggacgagcacaagtctgacatggaggaggctcagtagattttctggct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cacaggggcccaggacgagcacaagtctgacatggaggaggctcagtagattttctggct 204
Query: 481 tca 483
|||
Sbjct: 203 tca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 883
Length adjustment: 10
Effective length of query: 473
Effective length of database: 873
Effective search space: 412929
Effective search space used: 412929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
