NTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTATTTAGCTCTGAACCCCATTTTTTAATTAGGTATTTTCCTCA
TTTACATTTCCAATGCTATCCCAAAAGTCCCCCATACCCACCCCCTACTC
CCCTACCCACCCACTCCCCCTTTTTGGCCCTCGTGTTCCCCTGTACTGGG
GCATATAAAGTTTGCAAATCCAATGGGCCTCTCTTTGCAGTGATGGCCGA
CTAGGCCATCTTTTGATACATATGCAGTCAAGAGTCAATATGAACTGGTT
AGTTCATATTGTTGTTCCACCTATAGGGTTGCAGGTCCCTTTAGCTCCTT
GGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATTCAATAG
CTGACTGTGAGCATCTACTTCTGTGTTTGCTAGGCCCTGGCATATGGTCT
GAACCCCATTTTTAATAGGGGTATTTGGTCCTCTGGAGTCTAACTTCTTG
ANGTCTTTTTATATATTGAANTATAGNCCTCTATCAAATGTANGATTGAT
AAAGATTTTTACCCACCTGCTGGTGGCGGTTTTTGCCGGTGGACAGGGCC
TTTTGATTGCAAAACTTTTCAATTTTTTAAGGCCCCTTTGCCATTTTTTC
CTTTAGAAAAACCCTTCCGGAAAATTCCCCCTTTCCTTGGGTCCGGGGTC
CCCATTTTCTCTTTTTAAATTTAAAGAAGGGGTTAAGGGGGGGTTTGCCC
CCCGNCTTACCTTTCACAA

CGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAACCCCGGTTTTGTGAATTGGAAGA
CACTTGAAATCTTTATCAATGATTCACAAAGAACCAAGGATGTTGTTTGG
TAGGTAATATTTAGAGGAGGAGAAGTTTTTCCAGTCTTATTTCTTACTGT
GGTAAAGTGCGTAAAACATTAAGTTTCTGTCTAGTTACTTGTATCCATGT
GTTATTTAACCATCACCACTGCTCATCTCCATAAGCCTTTTAGGCTCTGA
AAGTTAAATGCATTATCAATTAAGTAGCAACTTCACTTTTTCCCTTCTCT
CTAACTCTAGCACCTGGGAAGTACTGTTCTATGTCTGTCTCCATGAGGAC
CCAAAATAATTAATATAAGAGATACTGATATTCTGTTTTATCTGTGATGA
GTTAATTTCTGTTGCATATATCAACATTCCTTTCTGTTTTAATAAAAATT
ATTATTATTTTGTTTAGGTATCCTAATTTGCTTATGTCTTCCTCTGTTCC
AAAACCCTTGGTTTTTGAACCCTTTACCTACTTTAAGTAAAACCCCCTAA
AAAAATGAACCGCCCTTTTTAAACCACCGCTTTCCCTTCTTTTTTGAAGA
TGGTCCCCAAAAAGGGGATTGGCCGGGCTCTACCAACACCTCCTTTTTTT
AAATTGTGGGCCCTTTTCCTCTTTCCCCCCNGGAAACTTTTTTTTCTTCT
CTTCTCCCAATAATTTCCCCTTTGCCTGTTCCTCCTCCCC

Query= MSMg01no376_m22.g1 MSMg01no376_m22.g1 CHROMAT_FILE:
MSMg01no376_m22.g1 PHD_FILE: MSMg01no376_m22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:47 2005
         (434 letters)



>mm_chr16_41607174_41608006
          Length = 833

 Score =  824 bits (426), Expect = 0.0
 Identities = 432/434 (99%), Gaps = 1/434 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaccccggttttgtgaattggaagacacttgaaatctttatcaatgattcacaaagaacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaccccggttttgtgaattggaagacacttgaaatctttatcaatgattcacaaagaacc 260

                                                                       
Query: 61  aaggatgttgtttggtaggtaatatttagaggaggagaagtttttccagtcttatttctt 120
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 aaggatgttgtttggtaggtaatatt-agaggaggagaagtttttccagtcttatttctt 319

                                                                       
Query: 121 actgtggtaaagtgcgtaaaacattaagtttctgtctagttacttgtatccatgtgttat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 actgtggtaaagtgcgtaaaacattaagtttctgtctagttacttgtatccatgtgttat 379

                                                                       
Query: 181 ttaaccatcaccactgctcatctccataagccttttaggctctgaaagttaaatgcatta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttaaccatcaccactgctcatctccataagccttttaggctctgaaagttaaatgcatta 439

                                                                       
Query: 241 tcaattaagtagcaacttcactttttcccttctctctaactctagcacctgggaagtact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcaattaagtagcaacttcactttttcccttctctctaactctagcacctgggaagtact 499

                                                                       
Query: 301 gttctatgtctgtctccatgaggacccaaaataattaatataagagatactgatattctg 360
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 500 gttctatgtctgtctccatgaggatccaaaataattaatataagagatactgatattctg 559

                                                                       
Query: 361 ttttatctgtgatgagttaatttctgttgcatatatcaacattcctttctgttttaataa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttttatctgtgatgagttaatttctgttgcatatatcaacattcctttctgttttaataa 619

                         
Query: 421 aaattattattatt 434
           ||||||||||||||
Sbjct: 620 aaattattattatt 633


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 833
Length adjustment: 9
Effective length of query: 425
Effective length of database: 824
Effective search space:   350200
Effective search space used:   350200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)