Query= MSMg01no376_n08.b1 MSMg01no376_n08.b1 CHROMAT_FILE:
MSMg01no376_n08.b1 PHD_FILE: MSMg01no376_n08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:49 2005
(538 letters)
>mm_chr16_74109938_74110875
Length = 938
Score = 994 bits (514), Expect = 0.0
Identities = 529/534 (99%)
Strand = Plus / Minus
Query: 5 gaattcaacaagttttgtgtttgttagttggtttgttagttagttaagtagctcttgttt 64
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 591 gaattcaacaagttttgtgtttgttagttggtttgttaattagttaagtagctcttgttt 532
Query: 65 gtttatttaatctttgggtataaaggcacctgcttatgattgtgtagtgtctaagtgttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gtttatttaatctttgggtataaaggcacctgcttatgattgtgtagtgtctaagtgttt 472
Query: 125 aataacacattgctctgtcctgtgagtgtttagatgtgaatgataactagattatttcat 184
|||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 471 aataacacattgttctgtcctgtgagtgtttagatgtgaataataactagattattttat 412
Query: 185 tattactggcattttgaagaaattgagtctgtgatacatgatcacttaactactattagt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tattactggcattttgaagaaattgagtctgtgatacatgatcacttaactactattagt 352
Query: 245 ttatgccattttaaggtgtgtgcattatatcttattacaatcaatctattgttttatgtt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ttatgccattttaaggtgtgtgcattatatcttattacaatcaatctattgttttatgtt 292
Query: 305 tctttaaaggcattaaatatgtatttactttctagaagatacatagtccatagctctaaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tctttaaaggcattaaatatgtatttactttctagaagatacatagtccatagctctaaa 232
Query: 365 aaattactcttattttggcaatgtttgatttattttttaatttaatttagaaaatgtact 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 aaattactcttattttggcaatgtttgatttattttttaatttaatttagaaaatgtact 172
Query: 425 acaatttaaatcaccactaaatcattccttaataactcaatgcatttgagatataaatga 484
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 171 acaatttaaatcaccactaaatcattgcttaataactcaatgcatttgagatataaatga 112
Query: 485 tcaatgttttcaaatctagcaatacagttttaaaattagcctgggactcttaaa 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 tcaatgttttcaaatctagcaatacagttttaaaattagcctgggactcttaaa 58
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space: 489984
Effective search space used: 489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_n08.g1 MSMg01no376_n08.g1 CHROMAT_FILE:
MSMg01no376_n08.g1 PHD_FILE: MSMg01no376_n08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:49 2005
(517 letters)
>mm_chr16_73973851_73974771
Length = 921
Score = 903 bits (467), Expect = 0.0
Identities = 503/521 (96%), Gaps = 11/521 (2%)
Strand = Plus / Plus
Query: 1 atgtgaccaatatttaacaactcagccttcagcaggagttagagtcaatcatgtgtgtgt 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 208 atgtgaccaatatttaacaac-------tcagcaggagttagagtcaatcatgtgtgtgt 260
Query: 61 gtgcgc----gcgtgcgcttgcgtgtacatgtgtgatttaagcaaccttttgttataaca 116
| |||| ||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 gcgcgcgcatgcgcgcgcttgcgtgtacgtgtgtgatttaagcaaccttttgttataaca 320
Query: 117 gttattaaacgctttttaaaattacatttctgcaactaaaagttatttatctgggaaggt 176
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttattaaacgctttttaaaattacatttctgcaactaaaagttatttatctgggaaggg 380
Query: 177 ttatttattaagttttcctgtgtccattgtaatatttaccttttaattttattttcttgt 236
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 ttatttattaagttttcctgtgtccattgtaatatttaccttttaagtttattttcttgt 440
Query: 237 gggattccattgtgtcactgtcagatataaatgatctaacttagaactcatgtagaattc 296
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 gggattccattgtgtcactgtcagatataaatgatctaacttagaattcatgtagaattc 500
Query: 297 tacatgcatactatgctttgcaaatgcaaggctggcttttctgtctcagagaaagtatat 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacatgcatactatgctttgcaaatgcaaggctggcttttctgtctcagagaaagtatat 560
Query: 357 ttcaatagacaaaagtacctaggactaaacagacaatgagacagccatacctctgagact 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcaatagacaaaagtacctaggactaaacagacaatgagacagccatacctctgagact 620
Query: 417 cctaatgtattttaaaagaatatgtatattcttttacacacacacataatttaaaattta 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cctaatgtattttaaaagaatatgtatattcttttacacacacacataatttaaaattta 680
Query: 477 aggaatacattttctagttataagtaaaaaacaatcaataa 517
||||||||||| |||||||||||||||||||||||||||||
Sbjct: 681 aggaatacattctctagttataagtaaaaaacaatcaataa 721
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 921
Length adjustment: 10
Effective length of query: 507
Effective length of database: 911
Effective search space: 461877
Effective search space used: 461877
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
