Query= MSMg01no377_m06.b1 MSMg01no377_m06.b1 CHROMAT_FILE:
MSMg01no377_m06.b1 PHD_FILE: MSMg01no377_m06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:04 2005
(467 letters)
>mm_chr16_21648174_21649040
Length = 867
Score = 787 bits (407), Expect = 0.0
Identities = 447/465 (96%), Gaps = 9/465 (1%)
Strand = Plus / Plus
Query: 4 ggaattcagtgatttc-ctactgcctggggacagctgtgccatggacccaagcccagaag 62
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ggaattcagtgaaggcactactgcctggggacagctgtgccatggacccaagcccagaag 270
Query: 63 ctgacatactgaatcaaacaggagtttctgggagctgaagagcagctccagttcctcttt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ctgacatactgaatcaaacaggagtttctgggagctgaagagcagctccagttcctcttt 330
Query: 123 cagaggacccaagttcaattcctagtacccacatgacagctcaccttggggttgtcttag 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cagaggacccaagttcaattcctagtacccacatgacagctcaccttggggttgtcttag 390
Query: 183 acctgagacaatttcctctttctcttcctcttcttcctcctccccctcctcctctcctcc 242
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 391 acctgagacaatttcctctttctcttcctcctcttcctcctccccctcctcctctcctcc 450
Query: 243 tctcctcgtcttctgtaatcccagctccaatatattcaataccctcatacaggcagataa 302
||| ||||||||||||||||||| | || ||||||||||||||||||||||||
Sbjct: 451 tct--------tctgtaatcccagctccaagagatccaataccctcatacaggcagataa 502
Query: 303 aataaaacaaagtacataaaatagaaaggattttaaaaaaaaaaaaaattcagaactggc 362
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 503 aataaaacaaagtacataaaatagaaaggatttttaaaaaaaaaaaaattcagaactggc 562
Query: 363 catagtgaagtttgaccctgggccttagccatcaagtggccctgagctccatggggtagt 422
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 catagtgaagtttgacccttggccttagccatcaagtggccctgagctccatggggtagt 622
Query: 423 agcctccctcactgctcaacctgtatctgcacctatcttacacag 467
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 agcctccctcactgctcaacctgtatctgcacctatcttacacag 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_m06.g1 MSMg01no377_m06.g1 CHROMAT_FILE:
MSMg01no377_m06.g1 PHD_FILE: MSMg01no377_m06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:04 2005
(406 letters)
>mm_chr16_21799524_21800329
Length = 806
Score = 725 bits (375), Expect = 0.0
Identities = 390/395 (98%)
Strand = Plus / Minus
Query: 12 gagagagagagagagagacagacagacagacagacagacagacatacagacagacagaca 71
|||||||||||||||||| ||| ||| ||| ||||||||||||||| |||||||||||||
Sbjct: 690 gagagagagagagagagagagagagagagagagacagacagacatatagacagacagaca 631
Query: 72 gacagagacagagacagatagacactaagtaggcaaacaaatgtatcattttcaatgtta 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 gacagagacagagacagatagacactaagtaggcaaacaaatgtatcattttcaatgtta 571
Query: 132 tattttcttcagggactgttcatgttcatctcttttatttcttatcatcttcagtattta 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tattttcttcagggactgttcatgttcatctcttttatttcttatcatcttcagtattta 511
Query: 192 gcatcttcactcagggaagtaaattcagtaatggtattttttccccttcagcaaaacaag 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gcatcttcactcagggaagtaaattcagtaatggtattttttccccttcagcaaaacaag 451
Query: 252 actagtactgcacatatcttatcctatcctgacgatgtccctttgtgtctatgagggctg 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 actagtactgcacatatcttatcctatcctgacgatgtccctttgtgtctatgagggctg 391
Query: 312 gtgttgttacctggcacaagttaaaatcatgtaggagatgggtgggcctcttggcatgtc 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gtgttgttacctggcacaagttaaaatcatgtaggagatgggtgggcctcttggcatgtc 331
Query: 372 agtggggaattatatagatcatatgtaactaaggt 406
|||||||||||||||||||||||||||||||||||
Sbjct: 330 agtggggaattatatagatcatatgtaactaaggt 296
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 806
Length adjustment: 9
Effective length of query: 397
Effective length of database: 797
Effective search space: 316409
Effective search space used: 316409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
