Query= MSMg01no377_o08.b1 MSMg01no377_o08.b1 CHROMAT_FILE:
MSMg01no377_o08.b1 PHD_FILE: MSMg01no377_o08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:14 2005
(214 letters)
>mm_chr16_9671480_9672093
Length = 614
Score = 317 bits (164), Expect = 3e-91
Identities = 170/172 (98%)
Strand = Plus / Plus
Query: 1 gagatgctcttgaagacaaaataaaaaacaaaaaccccacgttcacctctcctcccaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagatgctcttgaagacaaaataaaaaacaaaaaccccacgttcacctctcctcccaaac 260
Query: 61 aaatagtcagcatcctagcatcctgagaaacaatgcccaaggcctgagtttgacctctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 aaatagtcagcatcctagcatcctgagaaacaatgcccaaggcctgagttttacctctag 320
Query: 121 ctctctctctttctctctctctctctctctctctctctctctctctctctct 172
|||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 ctctctctctttctctctctctctctctctctctctctctctctttctctct 372
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 214
Length of database: 614
Length adjustment: 9
Effective length of query: 205
Effective length of database: 605
Effective search space: 124025
Effective search space used: 124025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no377_o08.g1 MSMg01no377_o08.g1 CHROMAT_FILE:
MSMg01no377_o08.g1 PHD_FILE: MSMg01no377_o08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:14 2005
(378 letters)
>mm_chr16_9854934_9855708
Length = 775
Score = 615 bits (318), Expect = e-180
Identities = 362/378 (95%), Gaps = 3/378 (0%)
Strand = Plus / Minus
Query: 1 atgagtgcaatagcagtgtaatgtccagatgacaccatttgctggcaatcttccccacct 60
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 atgagtgcaatggcagtataatgtccagatgacaccatttgctggcaatcttccccacct 697
Query: 61 ccagctcttataatctttccagcccctcttctatgatggagcatcctctttctcagtcag 120
|||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |
Sbjct: 696 ccagctcttataatctttccagtccctcttctatgatggaacatcctctttctcagtctg 637
Query: 121 tcatacctcagtctcctcatctgtgaaatggggatgatgaggctaattatgaggaaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tcatacctcagtctcctcatctgtgaaatggggatgatgaggctaattatgaggaaggaa 577
Query: 181 catgttaatttagattaaactttgcagggtacccaggaagttctcaggctggtggttttg 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 576 catgttaatttagattaaactttgcagggtacccaggaagttctcgggctggtggttttg 517
Query: 241 ttataagatccaactacattctgacttttcatagtagaaaagtctttaaaaaaaaaactc 300
||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 516 ttagaagatccaactacattctgacttttcatagtagaaaagtcttt---aaaaaaactc 460
Query: 301 agtagaggtgagatttggatccaagttttgctgaagtgcgccacagtcctgtgatgaaat 360
|||| |||| |||||||||||||||||||||||||||| | || ||||||||||||| ||
Sbjct: 459 agtaaaggtaagatttggatccaagttttgctgaagtgtgtcagagtcctgtgatgagat 400
Query: 361 gacagttgtatgaatgta 378
||||||||||||||||||
Sbjct: 399 gacagttgtatgaatgta 382
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 775
Length adjustment: 9
Effective length of query: 369
Effective length of database: 766
Effective search space: 282654
Effective search space used: 282654
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
