Query= MSMg01no377_o22.b1 MSMg01no377_o22.b1 CHROMAT_FILE:
MSMg01no377_o22.b1 PHD_FILE: MSMg01no377_o22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:17 2005
(453 letters)
>mm_chr16_80728645_80729497
Length = 853
Score = 845 bits (437), Expect = 0.0
Identities = 446/449 (99%), Gaps = 1/449 (0%)
Strand = Plus / Plus
Query: 5 gaattcagttaaaaagtagtcgtatgtactatgcttagtattgcagtactctcaatagtt 64
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcagttaaaaggtagt-gtatgtactatgcttagtattgcagtactctcaatagtt 264
Query: 65 agatatataggccacctagatacctgttaacagatgaacagataaagaatatgtgatcca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agatatataggccacctagatacctgttaacagatgaacagataaagaatatgtgatcca 324
Query: 125 tatgtacaataatttcatgcagtgaacattattttcttaagtaaaggaagataaatttca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatgtacaataatttcatgcagtgaacattattttcttaagtaaaggaagataaatttca 384
Query: 185 gtccaagaaatatatcatttgttcagacagctttacagtgtttggaaaagtttgaatatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtccaagaaatatatcatttgttcagacagctttacagtgtttggaaaagtttgaatatt 444
Query: 245 tcacatcaatgtgcaaaatttaaattatgttttaaaaagctgaaagtgttggcagcaata 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcacatcaatgtgcaaaatttaaattatgttttaaaaagctgaaagtgttggcagcaata 504
Query: 305 aaccctatttttaacctgtcaacactggcttcagcatagtttagttggcgatgcctacac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaccctatttttaacctgtcaacactggcttcagcatagtttagttggcgatgcctacac 564
Query: 365 attccctagttacacagtgaaataaacacatattatatggcttagataaaagctcacaaa 424
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 565 attccctagttacacagtgaaataaacacatattatatggcttagataaaagctcaaaaa 624
Query: 425 gataaaaagatgaatttattcttttactg 453
|||||||||||||||||||||||||||||
Sbjct: 625 gataaaaagatgaatttattcttttactg 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_o22.g1 MSMg01no377_o22.g1 CHROMAT_FILE:
MSMg01no377_o22.g1 PHD_FILE: MSMg01no377_o22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:17 2005
(234 letters)
>mm_chr16_80868472_80869105
Length = 634
Score = 342 bits (177), Expect = 8e-99
Identities = 213/225 (94%), Gaps = 4/225 (1%)
Strand = Plus / Minus
Query: 1 ttttaaaagtatactttcttgtatttaagttccatttaaaatgtattccaccaataagtg 60
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 363 ttttaaaagtatactttcttgtatttaagttccacttaaaatgtattccaccaaaaagtg 304
Query: 61 tattataaatatcaccaatcctattactttactaatttcaatcatatctctccatatact 120
|||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 303 cattatacatatcaccaatcctattacttttctaatttcaatcatatctctccatatact 244
Query: 121 aaaatttggtttaaaatatcttccagtaaacagtatagaaagaatatatagagagatata 180
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 243 aaaatttggtttaaagtatcttccagtaaacagtatagaaagaatatatatagagatata 184
Query: 181 tagatata-a-atgatagatagatagatagatagatagatagata 223
|||||||| | || |||||| |||||||||||||||||| |||||
Sbjct: 183 tagatatatagat-atagat-gatagatagatagatagacagata 141
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
