Query= MSMg01no379_n07.b1 MSMg01no379_n07.b1 CHROMAT_FILE:
MSMg01no379_n07.b1 PHD_FILE: MSMg01no379_n07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:41 2005
(497 letters)
>mm_chr16_42870747_42871643
Length = 897
Score = 946 bits (489), Expect = 0.0
Identities = 492/493 (99%)
Strand = Plus / Plus
Query: 5 gaattcaagacctgctagactataaaatatttctcatgaaaataatgaaacagtctatct 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaagaccagctagactataaaatatttctcatgaaaataatgaaacagtctatct 264
Query: 65 taatgcaacagtaaaatggtctgtgaacatcaactaagataactggtgaactgtatggat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taatgcaacagtaaaatggtctgtgaacatcaactaagataactggtgaactgtatggat 324
Query: 125 ctaattagaagtggaccttgatcaattacaagaaattacaagagctcatggattcacagc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctaattagaagtggaccttgatcaattacaagaaattacaagagctcatggattcacagc 384
Query: 185 actgcactggttacgtttgtgccaactatgaccaaatactcaacagagcaacttccagga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 actgcactggttacgtttgtgccaactatgaccaaatactcaacagagcaacttccagga 444
Query: 245 ggaagattttatgtcggctcactgttttagaggtttgagttcttgatcatttagcccaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggaagattttatgtcggctcactgttttagaggtttgagttcttgatcatttagcccaat 504
Query: 305 ggacacaggacaaatgtcatgtcagttgcaagatgtgtacaagaggagtgtgatgatttg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggacacaggacaaatgtcatgtcagttgcaagatgtgtacaagaggagtgtgatgatttg 564
Query: 365 agcatgctcagcccagggagtggcactattaaaaggtgtggtcctgttggagtaggtgtg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agcatgctcagcccagggagtggcactattaaaaggtgtggtcctgttggagtaggtgtg 624
Query: 425 gccttgttggagtaggtttgtcactgcgggtgtgtcttagctgcctagagtcagtcttcc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gccttgttggagtaggtttgtcactgcgggtgtgtcttagctgcctagagtcagtcttcc 684
Query: 485 actagcagccttc 497
|||||||||||||
Sbjct: 685 actagcagccttc 697
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no379_n07.g1 MSMg01no379_n07.g1 CHROMAT_FILE:
MSMg01no379_n07.g1 PHD_FILE: MSMg01no379_n07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:41 2005
(453 letters)
>mm_chr16_43033065_43033915
Length = 851
Score = 857 bits (443), Expect = 0.0
Identities = 450/453 (99%), Gaps = 2/453 (0%)
Strand = Plus / Minus
Query: 1 tctgtccgtacattgtcagcagcagttatctttgcctttttaattacagtcattttaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 tctgtccgtacattgtcagcagcagttatctttgcctttttaattacagtcattttaagg 792
Query: 61 tatgaaacctagcttactacagtcttgattttaatttgtttttaggattattattgatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 tatgaaacctagcttactacagtcttgattttaatttgtttttaggattattattgatgt 732
Query: 121 ttgacattctttcatttatttcttggctatttctgttcgctcccaagaaaaaagtacgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 ttgacattctttcatttatttcttggctatttctgttcgctcccaagaaaaaagtacgca 672
Query: 181 gttcctgttcccattgttcacgtacattaagtgccttatgctcattggatattaatcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 gttcctgttcccattgttcacgtacattaagtgccttatgctcattggatattaatcctt 612
Query: 241 atataaatctactgttttaagggttgcctctattctcattgctgttactttctcttttag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 atataaatctactgttttaagggttgcctctattctcattgctgttactttctcttttag 552
Query: 301 aaactaagcaggggaaaaacccaccaactactaggttttagaggtaaatactgtactcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aaactaagcaggggaaaaacccaccaactactaggttttagaggtaaatactgtactcta 492
Query: 361 aatcatttacttaatcagagaagtctactttctactgataagttctgggttttttttttt 420
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 491 aatcatttacttaatcagagaagtctactttctactgataagttctggg--ttttttttt 434
Query: 421 tttttgtacttctgaaaaaaaataataaacaca 453
|||||||||||| ||||||||||||||||||||
Sbjct: 433 tttttgtacttcagaaaaaaaataataaacaca 401
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 851
Length adjustment: 10
Effective length of query: 443
Effective length of database: 841
Effective search space: 372563
Effective search space used: 372563
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
