Query= MSMg01no381_g19.b1 MSMg01no381_g19.b1 CHROMAT_FILE:
MSMg01no381_g19.b1 PHD_FILE: MSMg01no381_g19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:50 2005
(575 letters)
>mm_chr16_69174804_69175779
Length = 976
Score = 1029 bits (532), Expect = 0.0
Identities = 562/572 (98%), Gaps = 2/572 (0%)
Strand = Plus / Minus
Query: 5 gaattcttgatattttatttattttgaattttataatttgatttattattaaaccaaaat 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gaattcttgatagtttatttattttgaattttataatttgatttattattaaaccaaaat 569
Query: 65 ttcttatattaaatttaaattgctttttgcacaataaaatatttgtttgatttattcaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ttcttatattaaatttaaattgctttttgcacaataaaatatttgtttgatttattcaaa 509
Query: 125 gttaaataggtggttttcccataattagttgtaaggaattattatagtatttgcagaaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gttaaataggtggttttcccataattagttgtaaggaattattatagtatttgcagaaag 449
Query: 185 cactgttctgtttccatgcaaaaaagatatt-aaaaaaagttctgatttaaagcagatat 243
|| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 448 cattgttctgtttccatgcaaaaaagatattaaaaaaaagttctgatttaaagcagatat 389
Query: 244 gtgtttactagattattctttattatcacaaagcccagtttcataatcaagttgtcagaa 303
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gtgtttactagatcattctttattatcacaaagcccagtttcataatcaagttgtcagaa 329
Query: 304 tggggaaatatttttaatatgttaacagtttttatgaaatgattataatggctattattg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tggggaaatatttttaatatgttaacagtttttatgaaatgattataatggctattattg 269
Query: 364 attctcaccctggtgacatataaaaataactataacccaagaatggagggcatacctgta 423
||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||| |
Sbjct: 268 attctcaccctggggacatatgaaaataactataacccaagaatggagggcacacctgca 209
Query: 424 agggaattatgcttaatttgacgtggaaagatcgagttatcatctggatcactgaagtag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 208 agggaattatgcttaatttgacgtggaaagatcgagttatcatctggatcactgaggtag 149
Query: 484 gaagagaaacctttcatcgagatcttgaggtgagaaaacccccctctactctgagccaat 543
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 148 gaagagaaacctttcatcgagatcttgaggtgagaaaa-ccccctctactctgagccaat 90
Query: 544 tctggtccaactctatgtagggacaacattaa 575
||||||||||||||||||||||||||||||||
Sbjct: 89 tctggtccaactctatgtagggacaacattaa 58
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 976
Length adjustment: 10
Effective length of query: 565
Effective length of database: 966
Effective search space: 545790
Effective search space used: 545790
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no381_g19.g1 MSMg01no381_g19.g1 CHROMAT_FILE:
MSMg01no381_g19.g1 PHD_FILE: MSMg01no381_g19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:50 2005
(489 letters)
>mm_chr16_69035389_69036277
Length = 889
Score = 938 bits (485), Expect = 0.0
Identities = 488/489 (99%)
Strand = Plus / Plus
Query: 1 attagtaattgaagcaaaagcttccccaaggtagtcatagaaatagggaccacatgcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attagtaattgaagcaaaagcttccccaaggtagtcatagaaatagggaccacatgcaag 260
Query: 61 gcattaggggatgaagtgctaataaagacattgcctttcaccgtttgtgttcatgagatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcattaggggatgaagtgctaataaagacattgcctttcaccgtttgtgttcatgagatt 320
Query: 121 tgtgataaaagaagggaaataggctgcagcactctgaattctcgttccatgggaaagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgataaaagaagggaaataggctgcagcactctgaattctcgttccatgggaaagaag 380
Query: 181 aagagcaggtttgacttaagaaaaatagcactaacatgggatagaggttgtaggaaaaca 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagagcaggtctgacttaagaaaaatagcactaacatgggatagaggttgtaggaaaaca 440
Query: 241 aggctcgtacagggagccaaaagagaacagaagcagtattttaaagcattcaaaagaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggctcgtacagggagccaaaagagaacagaagcagtattttaaagcattcaaaagaata 500
Query: 301 aaatcatatcaaactgaatacatcccctagtagaaaggaaaattcaaagataaccatata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaatcatatcaaactgaatacatcccctagtagaaaggaaaattcaaagataaccatata 560
Query: 361 tttttcccagtgtgaataaagaatgccgaaactgtgatatttaatgacagatagtagaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttttcccagtgtgaataaagaatgccgaaactgtgatatttaatgacagatagtagaga 620
Query: 421 acatgttcactcatatgtatatatggctattattcacttattagtgagtatatgctatgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acatgttcactcatatgtatatatggctattattcacttattagtgagtatatgctatgc 680
Query: 481 atgtccttt 489
|||||||||
Sbjct: 681 atgtccttt 689
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 889
Length adjustment: 10
Effective length of query: 479
Effective length of database: 879
Effective search space: 421041
Effective search space used: 421041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
