Query= MSMg01no382_h09.b1 MSMg01no382_h09.b1 CHROMAT_FILE:
MSMg01no382_h09.b1 PHD_FILE: MSMg01no382_h09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:12 2005
(650 letters)
>mm_chr16_74401313_74402365
Length = 1053
Score = 1023 bits (529), Expect = 0.0
Identities = 561/573 (97%), Gaps = 3/573 (0%)
Strand = Plus / Minus
Query: 81 ttatctagcacaatactttcagaagccatccatattggatcatgtataagaactctatcc 140
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 1053 ttatctagcacaatactttcagaagccatccatattggatcatgtataacaactccatcc 994
Query: 141 ttttgttactcttaatagtctgactcattggagatagagtgagatttgatggagatttaa 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993 ttttgttactcttaatagtctgactcattggagatagagtgagatttgatggagatttaa 934
Query: 201 gttgtataatgtgcactgatttttgaacatgcttttatttaaccaagagtaaaatttctt 260
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 933 gttgtataatgtgcactgatttttgaacatgcttttatttaactaagagtaaaatttctt 874
Query: 261 ggtcatatggtaactctactaacaattatgatatctgttttgttttttttt---aatttc 317
||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||
Sbjct: 873 ggtcatatggtaactctacaaacaattatgatatctcttttgtttttttttttaaatttc 814
Query: 318 accagtaacatatgaactaaatatatttttccaatgaagtaatgatcagtgcagactcaa 377
|||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 813 accagtaatatatgaactaaatatatttttccagtgaagtaatgatcagtgcagactcaa 754
Query: 378 tttgaagatttgaaatgaaacaatctcatactgtaataatatgtcttaaatttcctctag 437
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 753 tttgaagatttgaaatgaaacaatctcatactgtaataatatatcttaaatttcctctag 694
Query: 438 tcagaatttagaattctacctgtaattttggtcttttatatgctctccaattaccctgtg 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 tcagaatttagaattctacctgtaattttggtcttttatatgctctccaattaccctgtg 634
Query: 498 aagttttccatatttagtgaacacaagtgaacttgctacttagcagatttaaagatatga 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 aagttttccatatttagtgaacacaagtgaacttgctacttagcagatttaaagatatga 574
Query: 558 attatagattatagaaggatagagtcgaagagggagaagactcatttgaaaatatattac 617
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 573 attatagattatagaaggatagagtcgaagagggagaagaatcatttgaaaatatattac 514
Query: 618 atgtcctctagtatttggacacgtggacaccta 650
|||||||||||||||||||||||||||||||||
Sbjct: 513 atgtcctctagtatttggacacgtggacaccta 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1053
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1043
Effective search space: 667520
Effective search space used: 667520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_h09.g1 MSMg01no382_h09.g1 CHROMAT_FILE:
MSMg01no382_h09.g1 PHD_FILE: MSMg01no382_h09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:13 2005
(571 letters)
>mm_chr16_74217493_74218461
Length = 969
Score = 1056 bits (546), Expect = 0.0
Identities = 565/572 (98%), Gaps = 4/572 (0%)
Strand = Plus / Plus
Query: 1 atcatttctataacatttctctttgatgacctagcagctgctttctttgtgagtgaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcatttctataacatttctctttgatgacctagcagctgctttctttgtgagtgaaaat 260
Query: 61 gttctagaatatcctattgtgcatctttaaatattctctctatttatttactaggactct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttctagaatatcctattgtgcatctttaaatattctctctatttatttactaggactct 320
Query: 121 tggcagtaaacctcttgtatttttttaaccaccgtgtgtattcatagggaatatttaaaa 180
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 321 tggcagtaaacctcttgtatttttttaaccactgtgtgtattcatagagaatatttaaaa 380
Query: 181 tgacttcttagacagacttgaatatatataagattgatttcacctcaagtgttttgtgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgacttcttagacagacttgaatatatataagattgatttcacctcaagtgttttgtgct 440
Query: 241 tccat-tcagtggtcacagtcaatgcatattttcttatttttatgcctcattgtcattgc 299
||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 tccatgt-agtggtcacagtcaatgcatattttcttaattttatgcctcattgtcattgc 499
Query: 300 agaaaactgtaaacttggtgaatttcacaatgaacgtcttaaaaggtgacaatatgtgca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agaaaactgtaaacttggtgaatttcacaatgaacgtcttaaaaggtgacaatatgtgca 559
Query: 360 acacttgttatacaacataaaacatgccattggagagaaaaataaccctgaagaactaca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 acacttgttatacaacataaaacatgccattggagagaaaaataaccctgaagaactaca 619
Query: 420 acagctttaaccacgtgactggctattcaaatacttaaccaattaattaaatatatttgc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 acagctttaaccacgtgactggctattcaaatacttaaccaattaattaaatatatttgc 679
Query: 480 acaaaaggaagctttgatgaaaggacagatgggaaggaaaagacattaaaaaaatacatt 539
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 680 acaaaaggaagctttgatgaaaggacagatgggaaggaaaagacat--aaaaaatacatt 737
Query: 540 aacttaagaaaatgtttgaatgtgtactttag 571
||||||||||||||||||||||||||||||||
Sbjct: 738 aacttaagaaaatgtttgaatgtgtactttag 769
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 969
Length adjustment: 10
Effective length of query: 561
Effective length of database: 959
Effective search space: 537999
Effective search space used: 537999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
