Query= MSMg01no387_i10.b1 MSMg01no387_i10.b1 CHROMAT_FILE:
MSMg01no387_i10.b1 PHD_FILE: MSMg01no387_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:36 2005
(417 letters)
>mm_chr16_73944455_73945273
Length = 819
Score = 775 bits (401), Expect = 0.0
Identities = 414/419 (98%), Gaps = 2/419 (0%)
Strand = Plus / Plus
Query: 1 aattcttcccttatcccgattcctctgacacaggaaccaggggattgattgctttcctct 60
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattcttcccttaaccagattcctctgacacaggaaccaggggattgattgctttcctct 260
Query: 61 atgaaaatggacataaatgtgactacttgctctatagtcatgaaaagctactgcacatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgaaaatggacataaatgtgactacttgctctatagtcatgaaaagctactgcacatat 320
Query: 121 aacatgagacacaatgacctattgaacaacaattttcatgtgtagacttatattacatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacatgagacacaatgacctattgaacaacaattttcatgtgtagacttatattacatat 380
Query: 181 aaacccatgagcaaaatggtgctgtgcatttctatctgagaatttaagtatgagaagaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaacccatgagcaaaatggtgctgtgcatttctatctgagaatttaagtatgagaagaca 440
Query: 241 ataattggaaagaaaaaaaa--caaaaaacaaaaaatgatgttcagtcttgccctgaaaa 298
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataattggaaagaaaaaaaaaacaaaaaacaaaaaatgatgttcagtcttgccctgaaaa 500
Query: 299 ttcccctacttctgactgttcacagcagcaacatgcttagaccagattctcctcgaagat 358
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcccctacttctgactgtgcacagcagcaacatgcttagaccagattctcctcgaagat 560
Query: 359 gattttaatgcattagattgatttattattgatatttgcttatgagataaaggtttaat 417
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gattttaatgcattagattgatttattattgatatttgcttatgagataaaggtttaat 619
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 819
Length adjustment: 9
Effective length of query: 408
Effective length of database: 810
Effective search space: 330480
Effective search space used: 330480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no387_i10.g1 MSMg01no387_i10.g1 CHROMAT_FILE:
MSMg01no387_i10.g1 PHD_FILE: MSMg01no387_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:36 2005
(458 letters)
>mm_chr16_74091168_74092025
Length = 858
Score = 774 bits (400), Expect = 0.0
Identities = 409/412 (99%)
Strand = Plus / Minus
Query: 1 tttatgcagcacagaaagtgttatgtgtctgttgaatgtgacactaaaaataaaaggtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tttatgcagcacagaaagtgttatgtgtctgttgaatgtgacactaaaaataaaaggtaa 353
Query: 61 attcatatggctttgaacattggagacttaaactttgagatacagtagaatgtactacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 attcatatggctttgaacattggagacttaaactttgagatacagtagaatgtactacaa 293
Query: 121 agtattatgacacataaatggatatttgattaaaatgaaataaaaacaaataagtctata 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 agtattatgacccataaatggatatttgattaaaatgaaataaaaacaaataagtctata 233
Query: 181 acagaaatcttcaggtagtgagttgtgaccacccccacaatggtagcatattacatatcc 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 232 acagaaatcttcaggtagtgagttgtgaccactcccacaatggtagcatattacatatcc 173
Query: 241 ggcatactggacatttccagtaggattcataacagtagaaattagatatttatcttagga 300
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 172 ggcatactggacatttccagtaggattcataacaatagaaattagatatttatcttagga 113
Query: 301 tccataagagtatggaaactacagttacgaagtagcaacaaaaaaattttggttttggtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 tccataagagtatggaaactacagttacgaagtagcaacaaaaaaattttggttttggtc 53
Query: 361 gtcaccaccaaatgaggaactgtattcaagacttgcagcattaaaagagctg 412
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 gtcaccaccaaatgaggaactgtattcaagacttgcagcattaaaagagctg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
