NAATTATGTTNNNTTTTTTTNNNTTTTTNNNNNNTTNNTACGAGTTTATT
ATATTTTAAAAAGATNNGNNGNAATTGNAAATTATATTNTCNTTTCNANN
TATCTTGAATATGNNTGNACTTTGNCCNTGTGAATCATTTTTTTGGNAAA
TTTTTGNNNTNTTTAANNNTTTTNANAAAAATTTNATTNATTATTTTAAA
TAAAAAATAAAATTTTTTAANNCTAATGTTTTTATTATTTTAAAATTAAA
NNTANNTAAAAAAAAGTTATTTAAAGTTTTATAAAATTTTTAAAATTTTA
ANNNNTAANTTATTTTAAAGNTAAATTTAAANTTTNNNCCTTTTAATTTG
AATATTTGTTTTTATATNATAAATAATNTNTAATTTTTTTTTTTNNNNTT
TTNNTNTTTNNNANTAATAAACCTTAATTTTTTTTTTTTAATATAAAATA
ATTNAAATTTTTTATAAAAATTTTTTGTATTTTTTTTTGTGGNNNNTNNN
NNNNNTNTNNNNNTTTTTNNNTTAAATAAAAAAGATTTTGTGGGGGGGGG
TGTTGTGTAATAAGTGNNNNNTAAAAAANANAAAATATTTTTNATTTTAT
TGTTTGGGGGGAGGGGGGGGAGTGNATNTNTTTTNNNNATATATAATAAT
ATTTTTTTTTTTTTAATTTTTTTTNNTTATTTTTTTTATTTTTNNATNNN
NNNNTNNNTNNTTTTTTANAAAAAAAATAATATAATATAAATATATTTTT
TAAATATTANAAAAAATATTTATTATTTTTTTTTTTTTTTTATNTATTGT
GTATTTTAATTAATTTTTATTTTTTATTTATTTTTGGGGTTTGTT

CCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGCAGAGCCCAAGGCGGAT
GGAGGTTAAGACTCCAGGAAGGTGAGGGAAGCCAGGATCTGGTCCCATAG
AGTTAGAAATTGGGGATCACATGGAAGGAGAAGAAAACAGTTTTATAATC
TTACTCTTTCTCTTCAATTATTGTATAGGTCATGTTCTCTTTCAATATTG
TAAGGTTTATCTGCCTTCCCAAGAGGAAGGCAAAGAATAAACAGATATTC
TCTACTGATTGTCACTCCACAGTTCATCTCCCAAAGTCAAACAGGAAGCA
ACGAGCAAACACTGTGCGAGCTGTCTATGACCGCATTACTTGGGAAGTAT
ATGCTACCTGCTAGTGGCCAGACTTGGAAGTCAAAATTACAATTGCAGAC
CAAGGAGCCACGTCTACTTGGATGAAGTCATCTTCAAAAAGAAGGATGAG
TAAGAAATAGACTATAGATCAAGAAAGACTTTTAAGTTAGAGTTAGATGA
ACGGGAAGTGAAGGGAGCGGAGAGGTCCCCTCCTTCTCCCCCCCTCCCCT
TTTTCCCCATCTTCTGCCTTCCCCGGCCTCCGTCTCTCCCCCTTCTTCCT
CCCTTTCCTCCTTTCTTCTCCCCTTTGCTCCCCTTTTTCTTCTCCCCCGC
CCTTTCTCCTCCTCCCCCCCCGTTTTTTCCCCACCCCTCCCGTTTTTGCT
GTTTT

Query= MSMg01no388_e02.g1 MSMg01no388_e02.g1 CHROMAT_FILE:
MSMg01no388_e02.g1 PHD_FILE: MSMg01no388_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:33 2005
         (434 letters)



>mm_chr16_12270090_12270929
          Length = 840

 Score =  808 bits (418), Expect = 0.0
 Identities = 432/440 (98%), Gaps = 6/440 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   caggcagagcccaaggcggatggaggttaagactccaggaaggtgagggaagccaggatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 caggcagagcccaaggcggatggaggttaagactccaggaaggtgagggaagccaggatc 581

                                                                       
Query: 61  tggtcccatagagttagaaattggggatcacatggaaggagaagaaaacagttttataat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 tggtcccatagagttagaaattggggatcacatggaaggagaagaaaacagttttataat 521

                                                                       
Query: 121 cttactctttctcttcaattattgtataggtcatgttctctttcaatattgtaaggttta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 cttactctttctcttcaattattgtataggtcatgttctctttcaatattgtaaggttta 461

                                                                       
Query: 181 tctgccttcccaagaggaaggcaaagaataaacagatattctctactgattgtcactcca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tctgccttcccaagaggaaggcaaagaataaacagatattctctactgattgtcactcca 401

                                                                       
Query: 241 cagttcatctcccaaagtcaaacaggaagcaacgagcaaacactgtgcgagctgtctatg 300
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 400 cagttcatctcccaaagtcaaacaggaagcaacgagcaagcactgtgcgagctgtctatg 341

                                                                       
Query: 301 accgcattacttgggaagtatatgctacctgctagtggccaga------cttggaagtca 354
           |||| ||||||||||||||||||||||||||||||||||||||      |||||||||||
Sbjct: 340 accgaattacttgggaagtatatgctacctgctagtggccagactctgtcttggaagtca 281

                                                                       
Query: 355 aaattacaattgcagaccaaggagccacgtctacttggatgaagtcatcttcaaaaagaa 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 aaattacaattgcagaccaaggagccacgtctacttggatgaagtcatcttcaaaaagaa 221

                               
Query: 415 ggatgagtaagaaatagact 434
           ||||||||||||||||||||
Sbjct: 220 ggatgagtaagaaatagact 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 840
Length adjustment: 9
Effective length of query: 425
Effective length of database: 831
Effective search space:   353175
Effective search space used:   353175
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)