Query= MSMg01no390_k08.b1 MSMg01no390_k08.b1 CHROMAT_FILE:
MSMg01no390_k08.b1 PHD_FILE: MSMg01no390_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:37 2005
(246 letters)
>mm_chr16_93026376_93027022
Length = 647
Score = 429 bits (222), Expect = e-125
Identities = 240/246 (97%), Gaps = 1/246 (0%)
Strand = Plus / Minus
Query: 1 ctatcgtgagtcccttttta-cccccgtgttcagcagcagcacactggattactctggga 59
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 446 ctatcgtgagtccctttttatgccccgtgttcagcagcagcacactggattactcgggga 387
Query: 60 taaacaccagctctttgcaggggagactgacggtttttttctaggctggcttctgggaag 119
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 taaacagcagctctttgcaggggagactgacggtttttttctaggctggcttctgggaag 327
Query: 120 tgagaatgaaagcttccgtcttgggtgtcttccctcaaatctttctgatggtttcaagaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tgagaatgaaagcttccgtcttgggtgtcttccctcaaatctttctgatggtttcaagaa 267
Query: 180 gttctgggctcctgcctgagtctccaccctgagtcatttttcctttcttctttgttccat 239
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gcactgggctcctgcctgagtctccaccctgagtcatttttcctttcttctttgttccat 207
Query: 240 acagaa 245
||||||
Sbjct: 206 acagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 647
Length adjustment: 9
Effective length of query: 237
Effective length of database: 638
Effective search space: 151206
Effective search space used: 151206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no390_k08.g1 MSMg01no390_k08.g1 CHROMAT_FILE:
MSMg01no390_k08.g1 PHD_FILE: MSMg01no390_k08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:37 2005
(241 letters)
>mm_chr16_92872595_92873235
Length = 641
Score = 458 bits (237), Expect = e-133
Identities = 240/241 (99%)
Strand = Plus / Plus
Query: 1 atgtctcccagcccagctctccaggctgattcccacactctttgttcgtgtcgttcacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgtctcccagcccagctctccaggctgattcccacactctttgttcgtgtcgttcacag 260
Query: 61 ctctgcattctgccgtttgttcacagaatcattcccaataaaaagagaagttcaaaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctgcattctgccgtttgttcacagaatcattcccaataaaaagagaagttcaaaagaa 320
Query: 121 agggatagacgttgtcctcctggaggtgagtgagttcttcctgtgttttcagtaagacta 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 agggatagacgttgtcctcctggaggtgagtgagttcttcttgtgttttcagtaagacta 380
Query: 181 ggtgaccacagggaagtctttatgtttgggttgctgctccttggctgagtggaccttagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtgaccacagggaagtctttatgtttgggttgctgctccttggctgagtggaccttagg 440
Query: 241 c 241
|
Sbjct: 441 c 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
