Query= MSMg01no390_p13.b1 MSMg01no390_p13.b1 CHROMAT_FILE:
MSMg01no390_p13.b1 PHD_FILE: MSMg01no390_p13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:02 2005
(408 letters)
>mm_chr16_88139904_88140712
Length = 809
Score = 729 bits (377), Expect = 0.0
Identities = 401/409 (98%), Gaps = 1/409 (0%)
Strand = Plus / Plus
Query: 1 tgctatggacaaactgaagcatccccatatctcacacctgggtttaaaacaaaaacattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgctatggacaaactgaagcatccccatatctcacacctgggtttaaaacaaaaacattt 260
Query: 61 tcccataatatttctttgtttttaaagaaatcaaaatattcactacacctgtttcatact 120
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 261 tcccataatatttctttgtttttaaagaaatcaaaattttcactacacctgtttcataat 320
Query: 121 ggtgttaatatccttaggcatatttttttt-cactatggtgtagctcacttaacgttctc 179
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||
Sbjct: 321 ggtgttaatatccttaggcatattttttttccactatggtgtagctcacttaatgttttc 380
Query: 180 ctgtatgctagtacaatatttttctacatgcagttttcataaaccaaaactgatgttgga 239
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 ctgtaagctagaacaatatttttctacatgcagttttcataaaccaaaactgatgttaga 440
Query: 240 atgttgcaacattccaaacggtaagaactggccttctatctaactaaaatgttatcttcc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgttgcaacattccaaacggtaagaactggccttctatctaactaaaatgttatcttcc 500
Query: 300 ctcttctttttggagagaaacccactgaataagttttcatttaacctttccttctattta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctcttctttttggagagaaacccactgaataagttttcatttaacctttccttctattta 560
Query: 360 ttaaaacctaattgctggcacattttcctcagtaaaagggggcactagt 408
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttaaaacctaattgctggcacattttcctcagtaaaagggggcactagt 609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 809
Length adjustment: 9
Effective length of query: 399
Effective length of database: 800
Effective search space: 319200
Effective search space used: 319200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_p13.g1 MSMg01no390_p13.g1 CHROMAT_FILE:
MSMg01no390_p13.g1 PHD_FILE: MSMg01no390_p13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:02 2005
(478 letters)
>mm_chr16_88296921_88297798
Length = 878
Score = 893 bits (462), Expect = 0.0
Identities = 474/478 (99%)
Strand = Plus / Minus
Query: 1 catggctgtgagaaatggatgggtgaggggcagaaaactagcacaggtagggacagttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 catggctgtgagaaatggatgggtgaggggcagaaaactagcacaggtagggacagttaa 619
Query: 61 acaaagtcttggactttgcatttcattcagaaatactttccaagtgcaggaagacctggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 acaaagtcttggactttgcatttcattcagaaatactttccaagtgcaggaagacctggg 559
Query: 121 atgcactcagatgtcccagctgttgccccaatgtctccggctcacacttgccaaccagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 atgcactcagatgtcccagctgttgccccaatgtctccggctcacacttgccaaccagac 499
Query: 181 cttctttcagtctggaatgttcttctaggtcccctctcaggaatccctagctgccattta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 cttctttcagtctggaatgttcttctaggtcccctctcaggaatccctagctgccattta 439
Query: 241 aagtgttttacttactcagagtagtgttcctaagctgttcagactaagccctttctgact 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aagtggggtacttactcagagtagtgttcctaagctgttcagactaagccctttctgact 379
Query: 301 ttccaatctcttctcatgtccttcctgtctgcttcatggaacttcctctctgtctcttat 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 378 ttccaatctcttctcatgtccttcctgtctgcttcatgtaacttcctctctgtctcttat 319
Query: 361 gtgatcttgtcagtaaatggtagtcttatactagtgaacatctccaaggtcatgatgaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gtgatcttgtcagtaaatggtagtcttatactagtgaacatctccaaggtcatgatgaat 259
Query: 421 cctaaaaatgaaccagtacagatagtttgtgacatataacaagggtttggtaacctag 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cctaaaaatgaaccagtacagatagtttgtgacatataacaagggtttggtaacctag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space: 406224
Effective search space used: 406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
