Query= MSMg01no393_f21.b1 MSMg01no393_f21.b1 CHROMAT_FILE:
MSMg01no393_f21.b1 PHD_FILE: MSMg01no393_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:16 2005
(438 letters)
>mm_chr16_50513823_50514660
Length = 838
Score = 793 bits (410), Expect = 0.0
Identities = 433/452 (95%), Gaps = 18/452 (3%)
Strand = Plus / Plus
Query: 5 gaattccatatgcatagatgtgcttaaaaatgcctttgatgagtcttataataactctgt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 gaattccatatgcatagatgtgcttaaaaatgcctttgatgagtcttataataactctgt 246
Query: 65 agaaactttaaactgacatttgtcttcttatgcaaccgcttcttttagatatgtagaact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 agaaactttaaactgacatttgtcttcttatgcaaccgcttcttttagatatgtagaact 306
Query: 125 ctgtctttgctgggtgcttggctgcttgataaatggctagtttttctggctttctttctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ctgtctttgctgggtgcttggctgcttgataaatggctagtttttctggctttctttctt 366
Query: 185 tct------------------ttttttttttagtggtgctgttgtgggaactgattccaa 226
||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 367 tcttttttctttttctttttcttttttttttagtggtgctgttgtgggaacggattccaa 426
Query: 227 gggctgtacgggctaggcaaacagtctaccattgagcagcaatgcaacttctccgttgtt 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gggctgtacgggctaggcaaacagtctaccattgagcagcaatgcaacttctccgttgtt 486
Query: 287 tttaaaagacctttatgggcttccataatttctttagctataaggaggttgttgttctcc 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tttaaaagacctttatgggcttccataatttctttagctataaggaggttgttgttctcc 546
Query: 347 tgtgtcccatcacagcaccaaagctgtctcaggagagcgtttcagaaaatgttttaagca 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tgtgtcccatcacagcaccaaagctgtctcaggagagcgtttcagaaaatgttttaagca 606
Query: 407 atggcagtcttatcagaataaatatagagtct 438
||||||||||||||||||||||||||||||||
Sbjct: 607 atggcagtcttatcagaataaatatagagtct 638
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_f21.g1 MSMg01no393_f21.g1 CHROMAT_FILE:
MSMg01no393_f21.g1 PHD_FILE: MSMg01no393_f21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:17 2005
(392 letters)
>mm_chr16_50673221_50674012
Length = 792
Score = 750 bits (388), Expect = 0.0
Identities = 391/392 (99%)
Strand = Plus / Minus
Query: 1 cccagaatggagtgagttagcacaaatatggaacgacaggcagtttaatcaaagactaga 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 592 cccagaatggagtgagttagcacaaatatggaacgacaggcagtttaatcaaagaccaga 533
Query: 61 ataaggacatgatcgtgtgtcacgccaaagctgctatgtgatttcttatgtttagcattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ataaggacatgatcgtgtgtcacgccaaagctgctatgtgatttcttatgtttagcattt 473
Query: 121 gctttcccatgactctgatttggagagctgtattatcatgagtcatccttctgtttacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gctttcccatgactctgatttggagagctgtattatcatgagtcatccttctgtttacaa 413
Query: 181 ggctgacgttttgttctctcctgtcactgtgaggagaatctgatgttcacatcattctaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ggctgacgttttgttctctcctgtcactgtgaggagaatctgatgttcacatcattctaa 353
Query: 241 ttttctctcctaaaggagctagttatgtctgcagctgatactctcggtaaaaaaagggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ttttctctcctaaaggagctagttatgtctgcagctgatactctcggtaaaaaaagggat 293
Query: 301 catgaattgctctgggtttcagaaccttaaaggacatcttctaaggagggtgcaaaggcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 catgaattgctctgggtttcagaaccttaaaggacatcttctaaggagggtgcaaaggcc 233
Query: 361 taaaatcccttaatcaagtttctaatcgaaca 392
||||||||||||||||||||||||||||||||
Sbjct: 232 taaaatcccttaatcaagtttctaatcgaaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
