Query= MSMg01no393_k14.b1 MSMg01no393_k14.b1 CHROMAT_FILE:
MSMg01no393_k14.b1 PHD_FILE: MSMg01no393_k14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:41 2005
(513 letters)
>mm_chr16_93844114_93845026
Length = 913
Score = 961 bits (497), Expect = 0.0
Identities = 505/508 (99%)
Strand = Plus / Plus
Query: 6 ggaattcctaaccattatagcttttaaagtggtaatgctgttctgttgcttgttacgcac 65
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattcctaaccattagagcttttaaagtggtaatgctgttctgttgcttgttacgcat 265
Query: 66 tgttctaattacagtggctttaaatgcaggctcagaatttctcaaaaccctgttttccag 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tgttctaattacagtggctttaaatgcaggctcagaatttctcaaaaccctgttttccag 325
Query: 126 ataatgcttatgatcctgatgtgaatgctaaacagatctggatcgataaaacagtgatta 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ataatgcttatgatcctgatgtgaatgctaaacagatctggatcgataaaacagtgatta 385
Query: 186 gtgaccatatatgcttgacattcactgataatggcaacgggatgacagcagataagttac 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gtgaccatatatgcttgacattcactgataatggcaacgggatgacagcagataagttac 445
Query: 246 ataaaatgctaaggtaaaaacgtgttacagtttggggaatgatgacttctgtcttgaaaa 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ataaaatgctaaggtaaaaacgtgttacagtttggggaatgatgacttctgtcttgaaaa 505
Query: 306 ttatcctgtgtcatgcaaaaaaccatttcatagccttaagctttgtctttaaaacctgaa 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ttatcctgtgtcatgcaaaaaaccatttcatagccttaagctttgtctttaaaacctgaa 565
Query: 366 atgctatgcctacagtgtggttaggtcttctgttattttctacagccaggctatgcacac 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 atgctatgcctacagtgtggttaggtcttctgttattttctacagccaggctatgcacac 625
Query: 426 cacttcatatccccaccatgctcagcatccctgcccatatctgccttacttaanattcca 485
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 626 cacttcatatccccaccatgctcagcatccctgcccatatctgccttacttaaaattcca 685
Query: 486 gcatccctttgggattgtataatagcta 513
||||||||||||||||||||||||||||
Sbjct: 686 gcatccctttgggattgtataatagcta 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_k14.g1 MSMg01no393_k14.g1 CHROMAT_FILE:
MSMg01no393_k14.g1 PHD_FILE: MSMg01no393_k14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:41 2005
(403 letters)
>mm_chr16_94032697_94033501
Length = 805
Score = 741 bits (383), Expect = 0.0
Identities = 399/405 (98%), Gaps = 2/405 (0%)
Strand = Plus / Minus
Query: 1 caggccagcctgagcaacgtgatgagaccctgtgtcctaaaacaaaaccatgttaagtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 caggccagcctgagcaacgtgatgagaccctgtgtcctaaaacaaaaccatgttaagtct 413
Query: 61 cagtgagtctgtgatgaggaggttcttcaagagtgtagatctgtgaactctggaggcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 cagtgagtctgtgatgaggaggttcttcaagagtgtagatctgtgaactctggaggcttg 353
Query: 121 tttcta--accatgatgctggagatgacctgcagggtttcaccatggaagccatcttcgg 178
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 352 tttctaccaccatgatgctggagatgacctgcagggtttcaccatggaagccatcttcag 293
Query: 179 tctacctaatgccttggagggtaaaggaaagatctatctcatgggcccaacctttaggga 238
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tctacccaatgccttggagggtaaaggaaagatctatctcatgggcccaacctttaggga 233
Query: 239 ttacagtatgacattgtcatctactgtttacacttgagatctgtacaatcaggttacact 298
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 ttacagcatgacattgtcatctactgtttacacttgagatctgtacaatcaggttacact 173
Query: 299 ataagaatcacacacagagagatctcatgtcttaactatattgacaattttatgttgggc 358
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 172 ataagaatcacacacagagagatctcatgtcttaacgatattgacaattttatgttgggc 113
Query: 359 ctcatctgtagtttttcagggcatctggtcagacatgcttggaac 403
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 ctcatctgtagtttttcagggcatctggtcagacatgcttggaac 68
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 403
Length of database: 805
Length adjustment: 9
Effective length of query: 394
Effective length of database: 796
Effective search space: 313624
Effective search space used: 313624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
