Query= MSMg01no394_h20.b1 MSMg01no394_h20.b1 CHROMAT_FILE:
MSMg01no394_h20.b1 PHD_FILE: MSMg01no394_h20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:53 2005
(389 letters)
>mm_chr16_26595898_26596685
Length = 788
Score = 696 bits (360), Expect = 0.0
Identities = 381/388 (98%), Gaps = 1/388 (0%)
Strand = Plus / Minus
Query: 1 cccggaaagacacttaaatgtcattttgattcagactcttttgttttttccccccaatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 cccggaaagacacttaaatgtcattttgattcagactcttttgttttttccccccaatat 528
Query: 61 tcaaaatttcctctaaagtccttgccaagttgctgtttaggctctctttaacatctgttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 tcaaaatttcctctaaagtccttgccaagttgctgtttaggctctctttaacatctgttg 468
Query: 121 tgatagagaaccagttaccggacctcattttcacattgccttctctctaaagaagtgtta 180
||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 467 tgatagagaaccagttacc-gacctcattttcacatggccttctctctaaagaagtgtta 409
Query: 181 atatatggagctggttcagggtcctctgtcactgggtgactgtgtgtaacgaccctgcct 240
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 408 atatatggagctggttccgggtcctctgtcactgggtgactgtgtgtaacaaccctgcct 349
Query: 241 gagatctctgtaacaaggtcagacaacagaaacatctggatctagctgtcaccacagaat 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gagatctctgcaacaaggtcagacaacagaaacatctggatctagctgtcaccacagaat 289
Query: 301 tttcgtatctccccaaagctcattttccaaatcggatgaaccaggctagctccctctcca 360
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 288 tttcgtatctccccaaagctcattttccaaaccggaggaaccaggctagctccctctcca 229
Query: 361 accccaaggatgagaaaaacataccctg 388
||||||||||||||||||||||||||||
Sbjct: 228 accccaaggatgagaaaaacataccctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 788
Length adjustment: 9
Effective length of query: 380
Effective length of database: 779
Effective search space: 296020
Effective search space used: 296020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_h20.g1 MSMg01no394_h20.g1 CHROMAT_FILE:
MSMg01no394_h20.g1 PHD_FILE: MSMg01no394_h20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:53 2005
(436 letters)
>mm_chr16_26396061_26396896
Length = 836
Score = 665 bits (344), Expect = 0.0
Identities = 398/436 (91%), Gaps = 37/436 (8%)
Strand = Plus / Plus
Query: 1 agaaagcagtgagctgtggaacccaaggaaggatgaaactttgtagttctctataaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaaagcagtgagctgtggaacccaaggaaggatgaaactttgtagttctctataaggat 260
Query: 61 tcaaaacacagattgctttatgattgttttcttcaagattaaaatatttattcctgcccc 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 tcaaaacacagattgctttatgattgttttcttccagattaaaatatttattcctgcccc 320
Query: 121 tggtgaatttatattctaatagtgaagcataactaatctgatcattgttttagaaggcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggtgaatttatattctaatagtgaagcataactaatctgatcattgttttagaaggcat 380
Query: 181 tataagtatgatgctccctatctatctatatctatataatctatatatctgtatatcata 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 tataagtatgatgctccctatctatctatatctatataatc-atatatctgtatatcata 439
Query: 241 tatatgatatctgtatatcatatatacatatatgtatatatattacatatatatatacat 300
|||| |||| ||| ||||||| ||||||||||
Sbjct: 440 tata--------------cata----cat----gtatata-----catatatata----- 467
Query: 301 atacatatattggtactaggaaagcaagaaaacaagaggctgatatctcaagttaacatc 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 ---catatattggtactaggaaagcaagaaaacaagaggctgatatctcaagttaacatc 524
Query: 361 agctaaatgttagttaagagactgcaatgatacttcagatttaaaactgatttt-aaaaa 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 525 agctaaatgttagttaagagactgcaatgatacttcagatttaaaactgatttttaaaaa 584
Query: 420 aatcactgatacttca 435
||||||||||||||||
Sbjct: 585 aatcactgatacttca 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
