Query= MSMg01no395_f14.b1 MSMg01no395_f14.b1 CHROMAT_FILE:
MSMg01no395_f14.b1 PHD_FILE: MSMg01no395_f14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:10 2005
(476 letters)
>mm_chr16_11906140_11907015
Length = 876
Score = 880 bits (455), Expect = 0.0
Identities = 467/471 (99%)
Strand = Plus / Plus
Query: 6 gaattccttcagttccgatgtggcaaacctctgagaaggaagttacatgctagatgaaaa 65
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattccttcagaacagatgtggcaaacctctgagaaggaagttacatgctagatgaaaa 265
Query: 66 agaatcttaattaggatatgtgtcaaggaactataattatcaatttgcctaattaaaatg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 agaatcttaattaggatatgtgtcaaggaactataattatcaatttgcctaattaaaatg 325
Query: 126 agtatctgaacacgccttaagaatgtgagccctcatcagcagagcagagcggattatgtt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 agtatctgaacacgccttaagaatgtgagccctcatcagcagagcagagcggattatgtt 385
Query: 186 aacaaggaaggatggctgaaactgagactcacttatcaaactcctggagaaattggggct 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aacaaggaaggatggctgaaactgagactcacttatcaaactcctggagaaattggggct 445
Query: 246 ctgttgctcaggtagctaattcctggggatgagtgcaatgtaaacctgggacagctgctt 305
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ctgtcgctcaggtagctaattcctggggatgagtgcaatgtaaacctgggacagctgctt 505
Query: 306 gagttaactgaacacctctgaaggaggtgtgagatctgtctctatagactcaggctctac 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gagttaactgaacacctctgaaggaggtgtgagatctgtctctatagactcaggctctac 565
Query: 366 ttcccacagtaactgactgtcctgggggcatctctgagtacaactatgtacatttctgtg 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ttcccacagtaactgactgtcctgggggcatctctgagtacaactatgtacatttctgtg 625
Query: 426 gcatctgataccatgttcctccacacacacacctaagccttcctgccaggc 476
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gcatctgataccatgttcctccacacacacacctaagccttcctgccaggc 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no395_f14.g1 MSMg01no395_f14.g1 CHROMAT_FILE:
MSMg01no395_f14.g1 PHD_FILE: MSMg01no395_f14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:10 2005
(241 letters)
>mm_chr16_12057959_12058599
Length = 641
Score = 400 bits (207), Expect = e-116
Identities = 231/239 (96%)
Strand = Plus / Minus
Query: 1 ttgaaacaccaggagaagaaaattatggcagttcaaacatgttggtttaaaaatggaaga 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 439 ttgaaacaccaggagaagaaaatgatggcagttcaaacatgttggtttaaaaatggaaga 380
Query: 61 tgttcagaatgttagtggtctactgaaaatacaactttcaacagcagcattcagaacatt 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 379 tgttcagaatgttagtggtctactgaaaatacaactttcaacggcagcattcagaacatt 320
Query: 121 tgagattagacaattagctcttcgtggggactgtcatgagtattagaggatgctcatcag 180
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 319 tgagattagacaattagctcttcatggggactgtcatgagtattagaggatgctcagcag 260
Query: 181 ctgtggggactgtccttagcactgggggtggtcagcagctgtggggactgtcctgagca 239
||||||||||||| || || |||||||||||||||| ||||||||||||||||||||||
Sbjct: 259 ctgtggggactgtgctgagtactgggggtggtcagccgctgtggggactgtcctgagca 201
Score = 101 bits (52), Expect = 5e-26
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 178 cagctgtggggactgtccttagcactgggggtggtcagcagctgtggggactgtcctgag 237
||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||
Sbjct: 72 cagctgtggggactgtcctgagcactgggagtggccagcagctgtggggactgtcctgag 13
Query: 238 cact 241
||||
Sbjct: 12 cact 9
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 2
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
