Query= MSMg01no399_h20.b1 MSMg01no399_h20.b1 CHROMAT_FILE:
MSMg01no399_h20.b1 PHD_FILE: MSMg01no399_h20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:31 2005
(435 letters)
>mm_chr16_5849944_5850778
Length = 835
Score = 803 bits (415), Expect = 0.0
Identities = 424/427 (99%)
Strand = Plus / Plus
Query: 8 gaattccacccagcccttaacggagccctctggctcagtacaggcatcagtaggaaggtc 67
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattccacccaggtcttaacggagccctctggctcagtacaggcatcagtaggaaggtc 267
Query: 68 ttttcccttctcctttctgtgccaagcaggacaatatttcttccctgtgtgcaaggctct 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ttttcccttctcctttctgtgccaagcaggacaatatttcttccctgtgtgcaaggctct 327
Query: 128 tgtgctggaccttggcaatgtgctgtgtgtgggtcccttcatacttctcaccttctttca 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tgtgctggaccttggcaatgtgctgtgtgtgggtcccttcatacttctcaccttctttca 387
Query: 188 gctaagttttatgcaagagaaattaaggcatgggcttgttacttccgggccctggtcaca 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gctaagttttatgcaagagaaattaaggcatgggcttgttacttccgggccctggtcaca 447
Query: 248 cacgtgggtggctagtgcagaagccggtttgaatatctgctcacatgctttctgtgacgc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 cacgtgggtggctagtgcagaagccggtttgaatatctgctcacatgctttctgtgacgc 507
Query: 308 taaggcattatgagtttgatcaatgtactcttgatatggttgcaggcagctgcacacacc 367
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 taaggcattaggagtttgatcaatgtactcttgatatggttgcaggcagctgcacacacc 567
Query: 368 cgccgcctgtctgggaactcttgcttctttcttcccacaaccattcctcaatgcaaggca 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 cgccgcctgtctgggaactcttgcttctttcttcccacaaccattcctcaatgcaaggca 627
Query: 428 aggtgca 434
|||||||
Sbjct: 628 aggtgca 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no399_h20.g1 MSMg01no399_h20.g1 CHROMAT_FILE:
MSMg01no399_h20.g1 PHD_FILE: MSMg01no399_h20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:31 2005
(240 letters)
>mm_chr16_5926229_5926868
Length = 640
Score = 464 bits (240), Expect = e-135
Identities = 240/240 (100%)
Strand = Plus / Minus
Query: 1 ttcatttccagcagtgtgtagctttatagttagagttggacatatgctgcgtttcccccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttcatttccagcagtgtgtagctttatagttagagttggacatatgctgcgtttcccccc 381
Query: 61 cccctcctggacacattggccaatgctccgaattcttagatatcaaaatgggggatgata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cccctcctggacacattggccaatgctccgaattcttagatatcaaaatgggggatgata 321
Query: 121 aacaaagtaaaggagaggaatggtttggggtgtacaataggtaaaacattagcagatgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aacaaagtaaaggagaggaatggtttggggtgtacaataggtaaaacattagcagatgag 261
Query: 181 agaccagaaggttgtgtaaccacaaagtaagctgtgctagaaaaggtctgttttgagtcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agaccagaaggttgtgtaaccacaaagtaagctgtgctagaaaaggtctgttttgagtcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
