Query= MSMg01no402_i17.b1 MSMg01no402_i17.b1 CHROMAT_FILE:
MSMg01no402_i17.b1 PHD_FILE: MSMg01no402_i17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:28 2005
(421 letters)
>mm_chr16_51932712_51933532
Length = 821
Score = 746 bits (386), Expect = 0.0
Identities = 410/418 (98%), Gaps = 2/418 (0%)
Strand = Plus / Minus
Query: 5 gaattctttcttctctttatattatttatccttcaaaaaacatacacacagagagtcaca 64
|||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 505 gaattctttcttttctttatattatttatccttcaaaaaa-atacacacagagagtcaca 447
Query: 65 gacagacagacacatagacagacagacagacacacagagacacatacacacactctgggg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gacagacagacacatagacagacagacagacacacagagacacatacacacactctgggg 387
Query: 125 gtgttgggggtgcacaaatataccatatgatcatgcaatcacatcagtaattgagagtct 184
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 386 gtgttgggggtgcacaaatataccatatgatcatgcaatcacaacagtaattgagagtct 327
Query: 185 ttgcaaatcctaggcaggagatactaagagctcttgcctaatcataaagaccagattcca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ttgcaaatcctaggcaggagatactaagagctcttgcctaatcataaagaccagattcca 267
Query: 245 gatcccagaaccaaagcatcctgg-aatatattgcttttaactccagttctgaagaatcc 303
|||||||||||||||||||||||| || | | ||||||||||||||||||||||||||||
Sbjct: 266 gatcccagaaccaaagcatcctggaaaaaaaatgcttttaactccagttctgaagaatcc 207
Query: 304 aacacctttatctggcttctgtctactcacagacgtgcatataccacaatacacttatac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aacacctttatctggcttctgtctactcacagacgtgcatataccacaatacacttatac 147
Query: 364 aatgatacacatgcacataaatgtgtacctcaaaccccagggtgtcgttactcctcat 421
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 146 aatgatacacatgcacataaatgtgtacctcaaaccccagggtgtcattactcctcat 89
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 821
Length adjustment: 9
Effective length of query: 412
Effective length of database: 812
Effective search space: 334544
Effective search space used: 334544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no402_i17.g1 MSMg01no402_i17.g1 CHROMAT_FILE:
MSMg01no402_i17.g1 PHD_FILE: MSMg01no402_i17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:28 2005
(520 letters)
>mm_chr16_51765778_51766697
Length = 920
Score = 890 bits (460), Expect = 0.0
Identities = 505/520 (97%)
Strand = Plus / Plus
Query: 1 aatccataggatccacacagttgagggaaagaactgactcctgaagtttgtccttttgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatccataggatccacacagttgagggaaagaactgactcctgaagtttgtccttttgtt 260
Query: 61 tctatgttctctgtggcttgtagtatctgcttacacttagacatgcatcatacaaacaca 120
||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 261 tctatgttctctgtggcttgtagtacctgcttacacttagacatgcattatacaaacaca 320
Query: 121 cacatgcacacacacagtaatacaaatgataaataataagtgctaagtaataaaaaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 cacatgcacacacacagtaatacaaatgataaataataagtgctaagtaataaaaaaatt 380
Query: 181 aaagttctagctaggtttaaaaaaattaaaacacactcaggttcaaaattctgttttctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaagttctagctaggtttaaaaaaattaaaacacactcaggttcaaaattctgttttctc 440
Query: 241 tgacagtaagtaacaaaaacacttatctaaactagatttgaatgtaaagtatatgcatat 300
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgacagtaagtaacagaaacacttatctaaactagatttgaatgtaaagtatatgcatag 500
Query: 301 accttcctgtttctcacacttggaaacctttatatgtttgggagatatagatacaaatat 360
||||||||||||||||||| |||||||||||||||||||||||| | |||||||| ||||
Sbjct: 501 accttcctgtttctcacacatggaaacctttatatgtttgggagttttagatacagatat 560
Query: 361 agatagatagagatatatagacatagatgaagataattgctaagatttgataagtcacaa 420
||||||||||||||||||| | |||||||||| ||||||||||| |||||||||||||||
Sbjct: 561 agatagatagagatatataaatatagatgaaggtaattgctaaggtttgataagtcacaa 620
Query: 421 ctataatcccaggccttgcgaggctaaggcaggaaatttgctgtgaatttgaggctatca 480
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctataatcccaggcctttcgaggttaaggcaggaaatttgctgtgaatttgaggctatca 680
Query: 481 tggctacaaaatgaaattctgtctcaagaaaaagttcttt 520
||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tggctacaaaatgaaattctgtctcaagaaaaagttcttt 720
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space: 464100
Effective search space used: 464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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