Query= MSMg01no404_o23.b1 MSMg01no404_o23.b1 CHROMAT_FILE:
MSMg01no404_o23.b1 PHD_FILE: MSMg01no404_o23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:46 2005
(436 letters)
>mm_chr16_10120009_10120846
Length = 838
Score = 775 bits (401), Expect = 0.0
Identities = 425/437 (97%), Gaps = 10/437 (2%)
Strand = Plus / Minus
Query: 6 gaattccgggggtattctc-c---aagagcctccaaaaatcaaccaaccaatcaaccaac 61
|||||||||||||| | | ||||||||||||||||||||||||||||||||||||
Sbjct: 701 gaattccgggggta----cacaaaaagagcctccaaaaatcaaccaaccaatcaaccaac 646
Query: 62 caaccaaataaacaagcacttaccctaaacacttggagttgcactagggtccagactgcc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 caaccaaataaacaagcacttaccctaaacacttggagttgcactagggtccagactgcc 586
Query: 122 tgagtgtagcacctgccagcttgaaaaaggtctttagattgggtttagaatgtctgagta 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tgagtgtagcacctgccagcttgaaaaaggtctttagattgggtttagaatgtctgagta 526
Query: 182 atcttttctggtggactctctgtaacacactaaaaaattgtaaatgttacaacctattat 241
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 525 atcttttctggtggactctctgtaacacactaaaaatttgtaaatgttacaacctattat 466
Query: 242 ttcctgaacattacacattctaattataatctgctattgatttcatcttgggatcattgt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ttcctgaacattacacattctaattataatctgctattgatttcatcttgggatcattgt 406
Query: 302 tctagccaagtgttattttcctgggataaatttagcaaggatgcacatttatggagcaaa 361
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tctagccaagtgttattttcctgggataaatttagcaaggatgcacatttatggagcaac 346
Query: 362 ttaggtttttttttt--aatcaatttttgcctagaagcaaatataaccaaccgtgtgtta 419
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ttaggttttttttttttaatcaatttttgcctagaagcaaatataaccaaccgtgtgtta 286
Query: 420 tatttagctattctcag 436
|||||||||||||||||
Sbjct: 285 tatttagctattctcag 269
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 838
Length adjustment: 9
Effective length of query: 427
Effective length of database: 829
Effective search space: 353983
Effective search space used: 353983
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no404_o23.g1 MSMg01no404_o23.g1 CHROMAT_FILE:
MSMg01no404_o23.g1 PHD_FILE: MSMg01no404_o23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:46 2005
(206 letters)
>mm_chr16_9961655_9962260
Length = 606
Score = 377 bits (195), Expect = e-109
Identities = 201/203 (99%)
Strand = Plus / Plus
Query: 1 actttttgttctctagtttcagagataattccagcacccaaagccctgaaaatatgcaat 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 actttttgttctctagtttcagagataattccagcacccgaagccctgaaaatatgcaat 260
Query: 61 gtggccagcctggtcaattggccccaccccttggctggctcagttatgggctcctaattc 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtggccagcctggtcaattggctccaccccttggctggctcagttatgggctcctaattc 320
Query: 121 agaatcattcaatcagagtttgtgccaggaatttttttatttttattcatggttattagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaatcattcaatcagagtttgtgccaggaatttttttatttttattcatggttattagt 380
Query: 181 gtgtgtgtgtgtgtgtgtgtgtg 203
|||||||||||||||||||||||
Sbjct: 381 gtgtgtgtgtgtgtgtgtgtgtg 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 206
Length of database: 606
Length adjustment: 8
Effective length of query: 198
Effective length of database: 598
Effective search space: 118404
Effective search space used: 118404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
