Query= MSMg01no408_h05.b1 MSMg01no408_h05.b1 CHROMAT_FILE:
MSMg01no408_h05.b1 PHD_FILE: MSMg01no408_h05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:26 2005
(496 letters)
>mm_chr16_75218157_75219051
Length = 895
Score = 864 bits (447), Expect = 0.0
Identities = 481/493 (97%), Gaps = 3/493 (0%)
Strand = Plus / Minus
Query: 5 gaattcacctgtgtccaaagcttttttttttgtattcctttactggtattcctttaacag 64
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 695 gaattcacctgtgtccaaagc--ttttttttgtattcctttactggtattcctttaacag 638
Query: 65 ttttgtcacactacagaaaaattctccaaaataacatagtatcatatttatatccagaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 ttttgtcacactacagaaaaattctccaaaataacatagtatcatatttatatccagaga 578
Query: 125 atacaattaagatatatatttttagtattttatagaaaaaagtgtggaatacaattacaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 atacaattaagatatatatttttagtattttatagaaaaaagtgtggaatacaattacaa 518
Query: 185 tgctaaataaatatttcggaactctt-tttgtcaaaagaataatattcaatcataacaca 243
||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 517 tgctaaataaatatttcagaaatcttaattgtcaaaagaataatattcaatcataacaca 458
Query: 244 aatagtacctacttattttttacaataatgtaaattgtaaatatctgttgcttatttgct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 aatagtacctacttattttttacaataatgtaaattgtaaatatctgttgcttatttgct 398
Query: 304 gatcttagaataccactaattgctgagagatacaaatccatataaatttgtgtgtttatt 363
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gatcttagaatactactaattgctgagagatacaaatccatataaatttgtgtgtttatt 338
Query: 364 ctcagaagcttatctaaatgtttttatcattgatatcatgagtttttaaagctgatatta 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ctcagaagcttatctaaatgtttttatcattgatatcatgagtttttaaagctgatatta 278
Query: 424 caatgcacttagtatttaatggttttcactaccatgtctatttcattctcttaaaaataa 483
|| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 277 cagtgcacttagtatttaatgattttcactaccatgtctctttcattctcttaaaaataa 218
Query: 484 aaaagctcatggt 496
||||||| ||||
Sbjct: 217 gaaagctcttggt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 895
Length adjustment: 10
Effective length of query: 486
Effective length of database: 885
Effective search space: 430110
Effective search space used: 430110
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no408_h05.g1 MSMg01no408_h05.g1 CHROMAT_FILE:
MSMg01no408_h05.g1 PHD_FILE: MSMg01no408_h05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:26 2005
(469 letters)
>mm_chr16_75011277_75012145
Length = 869
Score = 891 bits (461), Expect = 0.0
Identities = 467/469 (99%)
Strand = Plus / Plus
Query: 1 atggtgtttgaattaagaagaccatgaggccagtcatttaatccatagttgatggctcat 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 atggtgtttgaattaagaagaccatgaggacagtcatttaatccatagttgatggctcat 260
Query: 61 gatttaaagaaagagaaacccgaggaatgtcacggctttgaaaaatagtgaacagatcca 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatttaaagaaagagaaacctgaggaatgtcacggctttgaaaaatagtgaacagatcca 320
Query: 121 acattataatctaggaggaaagttcgttagtcccatatcctcaagaaactggcatccaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acattataatctaggaggaaagttcgttagtcccatatcctcaagaaactggcatccaca 380
Query: 181 gaggaaagcaatgagcagacaaaggaatcttccttaggaaccatgaaagatgtgtattgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaggaaagcaatgagcagacaaaggaatcttccttaggaaccatgaaagatgtgtattgc 440
Query: 241 tgataagtgaacttcagctgggtgagccctgcctcagacctgtgatcctcaagaacagtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgataagtgaacttcagctgggtgagccctgcctcagacctgtgatcctcaagaacagtg 500
Query: 301 acaattaattaacgttggctaaacatccaaatgagtggcactcatttcaccagtgacaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acaattaattaacgttggctaaacatccaaatgagtggcactcatttcaccagtgacaca 560
Query: 361 agagaaggcttcctcactttaaagaaggggagaaaaactgcccatgcattattaacaggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agagaaggcttcctcactttaaagaaggggagaaaaactgcccatgcattattaacaggg 620
Query: 421 aggggagagccctgccgcctctagtgcagagcagcagaaaagcctctaa 469
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggggagagccctgccgcctctagtgcagagcagcagaaaagcctctaa 669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
