Query= MSMg01no408_i11.b1 MSMg01no408_i11.b1 CHROMAT_FILE:
MSMg01no408_i11.b1 PHD_FILE: MSMg01no408_i11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:32 2005
(501 letters)
>mm_chr16_40157977_40158876
Length = 900
Score = 922 bits (477), Expect = 0.0
Identities = 492/497 (98%), Gaps = 1/497 (0%)
Strand = Plus / Minus
Query: 5 gaattcatagccatttctttatttatctcattgttcttaaactttaacctacttaatgat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 700 gaattcatagccatttctttatttatctcattgttcttaaactttaacctactcaatgat 641
Query: 65 tgctaatttgggaagaaattatgatttcacatttctgtcacagtgcctgtgaggtacact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 tgctaatttgggaagaaattatgatttcacatttctgtcacagtgcctgtgaggtacact 581
Query: 125 tcggaagaggtcaaggtatcatagaagtagtgatttaaataatctaacttacgtttgaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 tcggaagaggtcaaggtatcatagaagtagtgatttaaataatctaacttacgtttgaag 521
Query: 185 gatgacatggccttatctctactatgtactttttgaagatcaaatataagacattgattt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gatgacatggccttatctctactatgtactttttgaagatcaaatataagacattgattt 461
Query: 245 tcagatattgagaggtttgttggaaaaatataacctataaaaaattaaacaaatgtgaat 304
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 460 tcagatattgagaggtttgttggaaaaatataacctataaaaa-ttaaacaaatgtgaat 402
Query: 305 gtactatagaacatgctcaatgttctggaaacttgaatttaaattaaattcactgcattc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gtactatagaacatgctcaatgttctggaaacttgaatttaaattaaattcactgcattc 342
Query: 365 agatttcagtagagagtagagtaggtcaagaagaccctgttactctatgaagcatttcaa 424
| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 341 aaatttcagtagagagtagagtaggtcaagaagaccctgttaatctatgaagcatttcaa 282
Query: 425 ctaataggataatccgtggtctctacccacaatgcctattttatcagcttgctggaattt 484
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ctaatagaataatccgtggtctctacccacaatgcctattttatcagcttgctggaattt 222
Query: 485 tttctctttcaagttta 501
|||||||||||||||||
Sbjct: 221 tttctctttcaagttta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 900
Length adjustment: 10
Effective length of query: 491
Effective length of database: 890
Effective search space: 436990
Effective search space used: 436990
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no408_i11.g1 MSMg01no408_i11.g1 CHROMAT_FILE:
MSMg01no408_i11.g1 PHD_FILE: MSMg01no408_i11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:32 2005
(497 letters)
>mm_chr16_40014592_40015488
Length = 897
Score = 891 bits (461), Expect = 0.0
Identities = 488/497 (98%)
Strand = Plus / Plus
Query: 1 aggagaagcctctgtttgaagaagttgtttatcataactttgtacttacacaatagattc 60
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 201 aggagaagcctctgtttgaagaaattgtttatcataactttgtacttacacactagattc 260
Query: 61 taaaacacagaagctacatattttattcttttaatcaggaaaatgcctttgttattaata 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaaacacagaagccacatattttattcttttaatcaggaaaatgcctttgttattaata 320
Query: 121 tatggatgctacctacatcctacctcaagaacattgtacgaataatagcttataaatcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatggatgctacctacatcctacctcaagaacattgtacgaataatagcttataaatcta 380
Query: 181 agcctgctaaaaccccacatcaacattagtgtttctccttttaatctagttgaatataag 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcctgccaaaaccccacatcaacattagtgtttctccttttaatctagttgaatataag 440
Query: 241 ccatctatctcagctaattacccatctgaatacttggacggagtgaatggaaagctgcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccatctatctcagctaattacccatctgaatacttggacggagtgaatggaaagctgcat 500
Query: 301 ttgtctgcttttgcaggtataacaataattgtattatatgggcactacactctatatcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgtctgcttttgcaggtataacaataattgtattatatgggcactacactctatatcag 560
Query: 361 agattagcaatttctaaagtatgtttgaagcaacaccctttgtgtaggaggttaatagat 420
|||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agattatcaatttctaaagtgtgtttgaagcaacaccctttgtgtaggaggttaatagat 620
Query: 421 attactaggagaacagcattttatggtcaatgaaatttagaacaattctagacttgggac 480
|||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 621 attactaggagaacagaattttatggtcaatgaaatttagaacaattctaggcttgggac 680
Query: 481 gaagctaaatattaaac 497
|||||||| ||||||||
Sbjct: 681 gaagctaagtattaaac 697
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
