Query= MSMg01no408_l04.b1 MSMg01no408_l04.b1 CHROMAT_FILE:
MSMg01no408_l04.b1 PHD_FILE: MSMg01no408_l04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:45 2005
(520 letters)
>mm_chr16_94966312_94967231
Length = 920
Score = 967 bits (500), Expect = 0.0
Identities = 512/516 (99%)
Strand = Plus / Plus
Query: 5 gaattcactctcctgcccgtagagtaggatgacatctttgggcgaatatatgtaaagaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactctcctgcccgtagagtaggatgacatctttgggcgaatatatgtaaagaaa 264
Query: 65 ccgagaccatatcaaattattcttttattgttccagtcaaaaaaagaggaacgcctcaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccgagaccatatcaaattattcttttattgttccagtcaaaaaaagaggaacgcctcaat 324
Query: 125 atgtaaacagtttccctaacacagcgatttcttaaatatatatatttatttattctaaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgtaaacagtttccctaacacagcgatttcttaaatatatatatttatttattctaaaa 384
Query: 185 aaatttggcattgtagagatttctcaatacataatttgtgctttcgcatcaggcatgctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaatttggcattgtagagatttctcaatacataatttgtgctttcgcatcaggcatgctt 444
Query: 245 tcgccttgtccgtgcgcagacatacttggattgagtacagggagttacaaaaggatcgga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcgccttgtccgtgcgcagacatacttggattgagtacagggagttacaaaaggatcgga 504
Query: 305 aggtgggtcgggagccaaaccagggctggagctctgcctggctttcacttgtaaaaagca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aggtgggtcgggagccaaaccagggctggagctctgcctggctttcacttgtaaaaagca 564
Query: 365 ttgtggggaggttggcagcaatgacctcagaagcagggggcagctattttactgcaaaga 424
||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 565 ttgtggggagggtggcagcaatgacctcagaagcagggggcagctattttactgcgaaga 624
Query: 425 aatctgaagccttgacgggagactttggggaagatgtttctccctgtgttttcttggcat 484
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 625 aatctgaagccttgatgggagactttggggaagatgtttttccctgtgttttcttggcat 684
Query: 485 ctctagaaggtcattggttttgcttaaagaaagcta 520
||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctctagaaggtcattggttttgcttaaagaaagcta 720
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space: 464100
Effective search space used: 464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no408_l04.g1 MSMg01no408_l04.g1 CHROMAT_FILE:
MSMg01no408_l04.g1 PHD_FILE: MSMg01no408_l04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:45 2005
(404 letters)
>mm_chr16_95110496_95111299
Length = 804
Score = 582 bits (301), Expect = e-170
Identities = 323/331 (97%), Gaps = 3/331 (0%)
Strand = Plus / Minus
Query: 77 tgtgggacaggagcaggggctggagagatgactctgtgggtaggagtgtgcactgatctt 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tgtgggacaggagcaggggctggagagatgactctgtgggtaggagtgtgcactgatctt 745
Query: 137 gcaactgacaaaccaagtttagcctcaagcgttacataggcaggctcactgcaagttctg 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gcaactgacaaaccaagtttagcctcaagcgttacataggcaggctcactgcaagttctg 685
Query: 197 agggacctgaccttgtcctctgtcagccacagtattccatgcata-cccccacac--aca 253
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 684 agggacctgaccttgtcctctgtcagccacagtattccatgcataccccccacacagaca 625
Query: 254 gatacacaaaataagaataatattggaaatctccttttaaaagcaaagcttaagagaata 313
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gatacacgaaataagaataatattggaaatctccttttaaaagcaaagcttaagagaatg 565
Query: 314 atcgtgccaggatgacgagagagagcaaggggaggagccagggtgacacagagaagatgt 373
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 564 atcgtgccaggatgacgagagagagcaaggggaggagccagggtgacacggagaagatgt 505
Query: 374 ggcatcaggaacaaaggacgctgacctagag 404
| |||| ||||||||||||||||||||||||
Sbjct: 504 gacatcgggaacaaaggacgctgacctagag 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 804
Length adjustment: 9
Effective length of query: 395
Effective length of database: 795
Effective search space: 314025
Effective search space used: 314025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
