Query= MSMg01no409_a08.b1 MSMg01no409_a08.b1 CHROMAT_FILE:
MSMg01no409_a08.b1 PHD_FILE: MSMg01no409_a08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:13 2005
(572 letters)
>mm_chr16_9140437_9141408
Length = 972
Score = 737 bits (381), Expect = 0.0
Identities = 392/397 (98%), Gaps = 3/397 (0%)
Strand = Plus / Minus
Query: 5 gaattctagacattgtagctgaccaggaagcagagaggccagagtgacctgcatactcca 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gaattctagacattgcagctgaccaggaagcagagaggccagagtgacctgcatactcca 338
Query: 65 gagaggtcctcccacctaaagtttccagagtatcccagaacagcctcatctcctggggag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gagaggtcctcccacctaaagtttccagagtatcccagaacagcctcatctcctggggag 278
Query: 125 caggcattaaaaccatcagcctgcagaggacattatgtctccagaaactaataagcttgc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 caggcattaaaaccatcagcctgcagaggacattatgtctccagaaactaataagcttgc 218
Query: 185 aatctcccattgcatggaacttcttagctgccataaagaagaaagttgtattattttcag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 217 aatctcccattgcatggaacttcttagctgccataaagaagaaagttgtattatttttag 158
Query: 245 gaaaatggatacaactcagactcattcatgttaaattagttaacccagcctt---aaaaa 301
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 157 gaaaatggatacaactcagactcattcatgttaaattagttaacccagccttaaaaaaaa 98
Query: 302 aaaacaaataaatatggtttcctcatttgtagtttctgaattctatgtggatacaggaaa 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 aaaacaaataaatatggtttcctcatttgtagtttctgaattctatgtggatacaggaaa 38
Query: 362 tcatacatacacatatacgcacgcacacactcacgca 398
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 tcatacatacacatatacgcacgcacacactcacgca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no409_a08.g1 MSMg01no409_a08.g1 CHROMAT_FILE:
MSMg01no409_a08.g1 PHD_FILE: MSMg01no409_a08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:13 2005
(233 letters)
>mm_chr16_8917329_8917961
Length = 633
Score = 406 bits (210), Expect = e-118
Identities = 225/230 (97%)
Strand = Plus / Plus
Query: 1 tgaacaatcctcacctccctttcttcattgagtgaggactcaggggcgaggcacaatctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaacaatcctcacctccctttcttcattgagtgaggactcaggggcgaggcacaatctt 260
Query: 61 acatgtcacctgacatgtctatttctcagcaaaggccaggtgtgggtttggtttttgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acatgtcacctgacatgtctatttctcagcaaaggccaggtgtgggtttggtttttgttt 320
Query: 121 gtttgtttgtttttgttttttcattctgtttgtttatatcttttcatttaagctgcatgt 180
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 gtttgtttgtttttgttttttcattctgtttgtttaaatcttttcatttaagctgcatgg 380
Query: 181 ttttgttatattttcaggtcattagggaaagccccgtgaattttctactg 230
||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 381 ccttgttatattttcaggtcattagggaaagccccgttaattttctactg 430
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
