Query= MSMg01no413_e09.b1 MSMg01no413_e09.b1 CHROMAT_FILE:
MSMg01no413_e09.b1 PHD_FILE: MSMg01no413_e09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:54 2005
(609 letters)
>mm_chr16_41462002_41463010
Length = 1009
Score = 1122 bits (580), Expect = 0.0
Identities = 599/608 (98%), Gaps = 6/608 (0%)
Strand = Plus / Plus
Query: 5 gaattcctgtgtgtatcca---tgtttgactcctcacattgaaggaaataccattaatag 61
||||||||||||| | | ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctgtgtgga---aaattgtttgactcctcacattgaaggaaataccattaatag 261
Query: 62 caaatatataaaagcaaaatgtgctgaataaaagtaatgataattgtatgtaaagtattg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 caaatatataaaagcaaaatgtgctgaataaaagtaatgataattgtatgtaaagtattg 321
Query: 122 atttttttaaaagtccccagtgataatatttgctatttaaacagggatattatttgtagc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atttttttaaaagtccccagtgataatatttgctatttaaacagggatattatttgtagc 381
Query: 182 cagaacttatggtatgcaaatgttgtcctatatcatccatttgctttctacttattggtc 241
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 382 cagaacttatggtatgcaaatgttgtcctatatcatccatttgccttctacttattggtc 441
Query: 242 atgaatatggatgtcatttatgcctgcaattaaaatatattctagtaatttacacctgaa 301
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 442 atgaatatggatgtcatttatgcctgcaattaaaatatagtctagtaatttacacctgaa 501
Query: 302 ttcaattacaaccttaaaataggctctcctctgagaccttagagagtaagtctcagtttg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ttcaattacaaccttaaaataggctctcctctgagaccttagagagtaagtctcagtttg 561
Query: 362 ctcattcctgtatttgttgtatgcaataatcatgaccagtttctgtctcccaccatcaga 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ctcattcctgtatttgttgtatgcaataatcatgaccagtttctgtctcccaccatcaga 621
Query: 422 ccctcatggtatggcagaactactcctagaggctcctttccaggtctccatcatgggaca 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ccctcatggtatggcagaactactcctagaggctcctttccaggtctccatcatgggaca 681
Query: 482 accatgtcgcttctgaactgaaagaaacaagccatacttgatttttttttctgatatttc 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 accatgtcgcttctgaactgaaagaaacaagccatacttgatttttttttctgatatttc 741
Query: 542 tataacaccttacgcacactttcctgctataaataattgataacccattttcctcccaaa 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tataacaccttacgcacactttcctgctataaataattgataacccattttcctcccaaa 801
Query: 602 atccatag 609
||||||||
Sbjct: 802 atccatag 809
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space: 598401
Effective search space used: 598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no413_e09.g1 MSMg01no413_e09.g1 CHROMAT_FILE:
MSMg01no413_e09.g1 PHD_FILE: MSMg01no413_e09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:54 2005
(245 letters)
>mm_chr16_41627756_41628400
Length = 645
Score = 431 bits (223), Expect = e-125
Identities = 241/251 (96%), Gaps = 8/251 (3%)
Strand = Plus / Minus
Query: 1 ctaattgtttaggtggctggttaccctaactttaattagcataaagaaagggctcagtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ctaattgtttaggtggctggttaccctaactttaattagcataaagaaagggctcagtgg 283
Query: 61 ggagagaagtatttcagcaagtaggcaaggacagaggtgtagcttagcacccacatggtc 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ggagagatgtatttcagcaagtaggcaaggacagaggtgtagcttagcacccacatggtc 223
Query: 121 ctgggttcagtctctagcattgctctctctctctctctgtctctctgcctctctgtctct 180
||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 222 ctgggttcagtctctagcattgctctctctctctctctg--tctctgtctctctgtctct 165
Query: 181 ctgtc------tctctctgtctctctctctttcacacacacacacacacacacacacaca 234
||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 ctgtctctctttctctctgtctctctctctttcacacacacacacacacacacacacaca 105
Query: 235 cacacacacac 245
|||||||||||
Sbjct: 104 cacacacacac 94
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 19
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
