Query= MSMg01no413_e15.b1 MSMg01no413_e15.b1 CHROMAT_FILE:
MSMg01no413_e15.b1 PHD_FILE: MSMg01no413_e15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:56 2005
(545 letters)
>mm_chr16_74691285_74692229
Length = 945
Score = 1031 bits (533), Expect = 0.0
Identities = 542/545 (99%)
Strand = Plus / Minus
Query: 1 ctcagtctatttaaagagccgtgttcctccggttgtcctctatcccctctgcctcttaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 ctcagtctatttaaagagccgtgttcctccggttgtcctctatcccctctgcctcttaca 813
Query: 61 ctctttctgcctcatcttctgtggaggtccctgagctgtgaggagaagggtttgatgaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 ctctttctgcctcatcttctgtggaggtccctgagctgtgaggagaagggtttgatgaga 753
Query: 121 catcccaaatagaaacccttaagtctattgattcatgtgttaacagatgatccatcaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 catcccaaatagaaacccttaagtctattgattcatgtgttaacagatgatccatcaaga 693
Query: 181 gtcatgtatttaaaattcgttactaagagaaaggtaattatatccctattgtcaacttag 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gtcatgtatttaaaattagttactaagagaaaggtaattatatccctattgtcaacttag 633
Query: 241 tctttgtcagtgtttcgggtcacagtgactaatgatttcaaaggcatctttgatttcaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tctttgtcagtgtttcgggtcacagtgactaatgatttcaaaggcatctttgatttcaaa 573
Query: 301 ggttagtgtgactttcaatgatttgctttttcttctattataaataatgtaaggaataaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ggttagtgtgactttcaatgatttgctttttcttctattataaataatgtaaggaataaa 513
Query: 361 agggacatttcttagcatttggtgcttaagttggatgctactcaatcttggaatgatatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 agggacatttcttagcatttggtgcttaagttggatgctactcaatcttggaatgatatg 453
Query: 421 gcttgggcccagtcagatttttcttcctggggtgaggggaggaaatcgtggaactccaca 480
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tcttgggcccagtcagatatttcttcctggggtgaggggaggaaatcgtggaactccaca 393
Query: 481 gttatatttctgagttgttgatgtaatgtggtaatgaaaacatccttcttatctctatct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gttatatttctgagttgttgatgtaatgtggtaatgaaaacatccttcttatctctatct 333
Query: 541 aatta 545
|||||
Sbjct: 332 aatta 328
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no413_e15.g1 MSMg01no413_e15.g1 CHROMAT_FILE:
MSMg01no413_e15.g1 PHD_FILE: MSMg01no413_e15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:56 2005
(504 letters)
>mm_chr16_74521120_74522023
Length = 904
Score = 917 bits (474), Expect = 0.0
Identities = 497/506 (98%), Gaps = 4/506 (0%)
Strand = Plus / Plus
Query: 1 caaattcagaggcatccttggaacaaatggaccatcagatgcagttttcatagattctct 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 caaattcagaggcatccttggaacaaatggaccatcagatgcagttttcatatattctct 260
Query: 61 atgtaaattggagaactaaaataatagttggtggcagtagaaatgtatggagttactcag 120
||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||
Sbjct: 261 atgtaaattggagaactaaaataatagttagtggtagtagaaatgtatggaattactcag 320
Query: 121 cacaacaggctggaaataccaactggaaagacgaaatgtactatttcacagatgttttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacaacaggctggaaataccaactggaaagacgaaatgtactatttcacagatgttttcc 380
Query: 181 accacagagatgcaaaaccctagcaaattgttcagagtgtaaaacgcctcaagtatcttg 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 accacagagatgcaaaaccctagcaaattgttcagagtgtaaaatgcctcaagtatcttg 440
Query: 241 agtcttaa--ggcttgctggctcgccataaatctaactggtaaatttagaaacattacta 298
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtc--aataggcttgctggctcgccataaatctaactggtaaatttagaaacattacta 498
Query: 299 acagaacgtatattaaaacaaaattgcaagagcagtgttttccataaccaacacatgttg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 acagaacgtatattaaaacaaaattgcaagagcagtgttttccataaccaacacatgttg 558
Query: 359 ctatagtctgtgtgatgagcaattactattttccattattgaatgtttttccctttacag 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ctatagtctgtgtgatgagcaattactattttccattattgaatgtttttccctttacag 618
Query: 419 aaatacgcacacatcctggagggcaaaacaaacatggcatttgtttttcagcatattctt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aaatacgcacacatcctggagggcaaaacaaacatggcatttgtttttcagcatattctt 678
Query: 479 ttaaaagtggatcattattctttaaa 504
||||||||||||||||||||||||||
Sbjct: 679 ttaaaagtggatcattattctttaaa 704
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
