Query= MSMg01no413_l11.b1 MSMg01no413_l11.b1 CHROMAT_FILE:
MSMg01no413_l11.b1 PHD_FILE: MSMg01no413_l11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:28 2005
(285 letters)
>mm_chr16_5938259_5938943
Length = 685
Score = 551 bits (285), Expect = e-161
Identities = 285/285 (100%)
Strand = Plus / Minus
Query: 1 acaaaaggtcaaggtcaccagctctccacagaaagatgctggggacttaagaagcagagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 acaaaaggtcaaggtcaccagctctccacagaaagatgctggggacttaagaagcagagc 426
Query: 61 cacgatgggatgacagactttgttcttatagctggctcacctcgtgttctcccatgtgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cacgatgggatgacagactttgttcttatagctggctcacctcgtgttctcccatgtgca 366
Query: 121 gtgaactgcactcattcaaacaaagagcagggattcccccaccctcaataacatcactac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gtgaactgcactcattcaaacaaagagcagggattcccccaccctcaataacatcactac 306
Query: 181 ggtgatgctttgccctgtagttaaaatgattgttgtgtggctttaggtttcatgtttgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ggtgatgctttgccctgtagttaaaatgattgttgtgtggctttaggtttcatgtttgtt 246
Query: 241 ttatgcaatgttggtgatccagccctggaccatacacacagcaga 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ttatgcaatgttggtgatccagccctggaccatacacacagcaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no413_l11.g1 MSMg01no413_l11.g1 CHROMAT_FILE:
MSMg01no413_l11.g1 PHD_FILE: MSMg01no413_l11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:29 2005
(245 letters)
>mm_chr16_5797244_5797888
Length = 645
Score = 474 bits (245), Expect = e-138
Identities = 245/245 (100%)
Strand = Plus / Plus
Query: 1 taggcttccaccacagagggcactgggttcgtagactactgttacaattctttgatatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taggcttccaccacagagggcactgggttcgtagactactgttacaattctttgatatgg 260
Query: 61 tttattacttgtatgggatgtgcatatgggtgaatattgtatttgtgaaatatactcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttattacttgtatgggatgtgcatatgggtgaatattgtatttgtgaaatatactcttt 320
Query: 121 aatagaaaataaaggccaaaattctgcacatttataagtgtagtgtatacaatgtatgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatagaaaataaaggccaaaattctgcacatttataagtgtagtgtatacaatgtatgca 380
Query: 181 ctcatgggtttggctgtgtgtatatatgtatacagaggtgagtgtggccatcagaaatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcatgggtttggctgtgtgtatatatgtatacagaggtgagtgtggccatcagaaatga 440
Query: 241 ttgtc 245
|||||
Sbjct: 441 ttgtc 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
