Query= MSMg01no416_c16.b1 MSMg01no416_c16.b1 CHROMAT_FILE:
MSMg01no416_c16.b1 PHD_FILE: MSMg01no416_c16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:44 2005
(622 letters)
>mm_chr16_27889913_27890934
Length = 1022
Score = 791 bits (409), Expect = 0.0
Identities = 421/425 (99%)
Strand = Plus / Minus
Query: 198 cttttgtaataagacctgatgattttgtgaatttcctccatttctgttatcaaatttccc 257
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1022 cttttgtaataagacctgatgattttgtgaatttcctccatttctgttatcatatttccc 963
Query: 258 tttcctgtctggttttgataatttggatacggtttctgagccttttggttagtttggcta 317
|||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 962 tttcctgtctggttttgataatttggatacggcttctgagccttttagttagtttggcta 903
Query: 318 agagtttgtgtatcttattgattttctcaaagaaccaggtcttagttttgttgattcttt 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 agagtttgtgtatcttattgattttctcaaagaaccaggtcttagttttgttgattcttt 843
Query: 378 gtattgcatctcttcttttatggaaaagtggtggtcttcattctcttagcgaccctgaag 437
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 gtattgcatctcttcttttctggaaaagtggtggtcttcattctcttagcgaccctgaag 783
Query: 438 gaaagggaagcacaaagaaaggaaggctggtaggtgcacactttctcacttgaagccttt 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 gaaagggaagcacaaagaaaggaaggctggtaggtgcacactttctcacttgaagccttt 723
Query: 498 gactccatagctcagcctatctgtaccaaacctggcaagtgatcccttatccagtctaga 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gactccatagctcagcctatctgtaccaaacctggcaagtgatcccttatccagtctaga 663
Query: 558 gaatgagtccctttcctttccaaaaggttcaaatctgattatggttaatagaaatttcca 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gaatgagtccctttcctttccaaaaggttcaaatctgattatggttaatagaaatttcca 603
Query: 618 cttca 622
|||||
Sbjct: 602 cttca 598
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no416_c16.g1 MSMg01no416_c16.g1 CHROMAT_FILE:
MSMg01no416_c16.g1 PHD_FILE: MSMg01no416_c16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:44 2005
(530 letters)
>mm_chr16_27832663_27833595
Length = 933
Score = 967 bits (500), Expect = 0.0
Identities = 525/534 (98%), Gaps = 5/534 (0%)
Strand = Plus / Plus
Query: 1 ttttacccactctatacagaactctgaaaactagaacctagtctaaattcagtgactgta 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttacccactctatacagaactatgaaaactagaacctagtctaaattcagtgactgta 260
Query: 61 gcatttgaatgcctctctggactcagttttatattaattagggcatcaatttatacaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcatttgaatgcctctctggactcagttttatattaattagggcatcaatttatacaatc 320
Query: 121 tacaaaaaa-tattcagctattcaatgtgaacttatttttattcgtgtctaaaatgaggg 179
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacaaaaaaatcttcagctattcaatgtgaacttatttttattcgtgtctaaaatgaggg 380
Query: 180 aagtggagttaatcattcaaatacaaaaaataatattgggtgtttttcaatttcacaaca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtggagttaatcattcaaatacaaaaaataatattgggtgtttttcaatttcacaaca 440
Query: 240 aaata-ctttataaaaacaactttactacaaatagttgcaagaatatcagatatgtatct 298
||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 aaatatctttataaaaacaactttactacaaatagttgcaagaataacagatatgtatct 500
Query: 299 gagaaatgaaatataaagatgaacaaatatgaaagtatcttaaagtttcagcaaaattaa 358
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaaaatgaaatataaagatgaacaaatatgaaagtatcttaaagtttcagcaaaattaa 560
Query: 359 tgactgtaatagaaaaatcttaacaaatgattgtgatatgctttttaaagtcataagaaa 418
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 561 tgactgtaatagaaaaatcttaacaaatgattgtgatatgctttttaa-gtcataagaaa 619
Query: 419 ccacaacctacaagccaagttgaatatgaagcagcatgttcctaagtctggattttgtaa 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ccacaacctacaagccaagttgaatatgaagcagcatgttcctaagtctggattttgtaa 679
Query: 479 aaattgtttatgtcagttttctagcttgattattttt--atcaatctctgaatt 530
||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 680 aaattgtttatgtcagttttctagcttgattatttttttatcaatctctgaatt 733
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 933
Length adjustment: 10
Effective length of query: 520
Effective length of database: 923
Effective search space: 479960
Effective search space used: 479960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
