ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTAAAAATATACAAAAACAAAACCCACATGCCGCCCTGATCCTGTTGAT
AGCTGTGACATTAATGTTAACATTAACGTTCAAAATGCACTGCTGTTTTG
CTGACCAAATCATAATAACCCATCATAAGGGCAGGCAAAGTGAGTCACTA
GGCCAAAGGTAGTTCCCTATACAACCAACCAATGCCTGAAAAGGTTACTT
GCTACACCAATGAGAATAAGCCAGCTAGCCCTGTTGCCTAAACCGGCCCC
TTACAAGGTATAAAAAGTGTGTTGTTCTGAGTCTCTCCTCTGGCTTGTGT
GCTGAGACGGGGGTTCCCAAATTGTTGGTTTAATAAAAATCCTCTTGCAG
TGATGGTAATCTCTGTGGTCTTTGTGAGTGAGGGTCTTATATTTTTGGTT
GTGAGCCTAGCCTTTAGCAGTTTGCAGTGATGGTAATCTCTGTGGTCTTT
GTGAGTGAGGGTCGTATATTTTTGGTTGTGAGCCTAGCCTTTAGCAGTTT
GCAGTGATGATAATCTCTGTGGTCTTTGTGAGTGAGGGTCTTATATTTTT
GGTTGTGAGCCTAGCCTTTAACAGTTTGCAGTGATGGTAATCTCTTTGGG
CTTTGTGAGTGAGGGCCTTTAAATAGACTCCCACCGTACTGAAACACAAG
GGGAGATTAATGTTACTTGGGGGAAAGCCTAAGCCATATTTTTCGTTCCC
ACACTGAATTCCTCCCGGTAAAG

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTTCTTAGATAATTGTTCCTATCTTTTAA
AAAGTGAGCAAATCAGATTCTAACAGCAAACCAATCTTTGATTTGAAAGT
ACTTTTATAACAAGCTCAGAAATAGCTTGTTACGAAAAGGCTTAAATCTC
CATCTTTTTAAACAAATTATAAATATGGCATTCTTCTTCGAATAATTCTA
AATGCTCCCTTTGAATATAAATAGTTATCACAAAGTAGTTTTTCAAGGTT
TTTTTTTAAAGACCTGTGTTAGCAGTACATTATGCCTGCTCATTGCTGTT
TCTATAGGATGCCACAAATATAAGAGCAATAATAATATCTAAGTCAATAA
AATATAAGATAAAGGTAAGGCTATGACATGGTAATCACTCCTTGGTCATG
TTAGAATCTATATACATTGAACATGAGTTTTGTTACATCCTGAACTAGGA
GGAAATAAAGAGATTTAACAGACAAGAGACCAGTTTTATCAGAGAAGACT
AGAGACAAACNGAAAGGAAACTGTTATGCGGGGAGAGGAACTCACACCTA
TACAGAGAGAGGGAGAGAGAAAGAGTGTGTGTGAGAGACAGAGAGACNGA
CCGAGGGCTAGACTGACTGAGAGACAAGGAGACCGAGAGGCCGAATGCAG
GCGAGACTCCCAAAGACCTATAAACTGAGAGGCTCACGAAAAGGGATACC
TTTCTCTCCCCCCCAAANCCCCCTCTTCTTTCTCA

Query= MSMg01no417_f21.g1 MSMg01no417_f21.g1 CHROMAT_FILE:
MSMg01no417_f21.g1 PHD_FILE: MSMg01no417_f21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:14 2005
         (504 letters)



>mm_chr16_81156576_81157478
          Length = 903

 Score =  930 bits (481), Expect = 0.0
 Identities = 498/504 (98%), Gaps = 1/504 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttcttagataattgttcctatcttttaaaaagtgagcaaatcagattctaacagcaaacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 ttcttagataattgttcctatcttttaaaaagtgagcaaatcagattctaacagcaaacc 644

                                                                       
Query: 61  aatctttgatttgaaagtacttttataacaagctcagaaatagcttgttacgaaaaggct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 aatctttgatttgaaagtacttttataacaagctcagaaatagcttgttacgaaaaggct 584

                                                                       
Query: 121 taaatctccatctttttaaacaaattataaatatggcattcttcttcgaataattctaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 taaatctccatctttttaaacaaattataaatatggcattcttcttcgaataattctaaa 524

                                                                       
Query: 181 tgctccctttgaatataaatagttatcacaaagtagtttttcaaggtttttttttaaaga 240
           ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 523 tgctccctttgaatataaatagttaccacaaagtagtttttcaagg-ttttttttaaaga 465

                                                                       
Query: 241 cctgtgttagcagtacattatgcctgctcattgctgtttctataggatgccacaaatata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 cctgtgttagcagtacattatgcctgctcattgctgtttctataggatgccacaaatata 405

                                                                       
Query: 301 agagcaataataatatctaagtcaataaaatataagataaaggtaaggctatgacatggt 360
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 404 agagcaataataatatctaagtcaataaagtataagataaaggtaaggctatgacatggt 345

                                                                       
Query: 361 aatcactccttggtcatgttagaatctatatacattgaacatgagttttgttacatcctg 420
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 aatcactccttgttcatgttagaatctatatacattgaacatgagttttgttacatcctg 285

                                                                       
Query: 421 aactaggaggaaataaagagatttaacagacaagagaccagttttatcagagaagactag 480
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 aaccaggaggaaataaagagatttaacagacaagagaccagttttatcagagaagactag 225

                                   
Query: 481 agacaaacngaaaggaaactgtta 504
           |||||||| |||||||||||||||
Sbjct: 224 agacaaacagaaaggaaactgtta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 903
Length adjustment: 10
Effective length of query: 494
Effective length of database: 893
Effective search space:   441142
Effective search space used:   441142
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)