Query= MSMg01no418_k23.b1 MSMg01no418_k23.b1 CHROMAT_FILE:
MSMg01no418_k23.b1 PHD_FILE: MSMg01no418_k23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:57 2005
(597 letters)
>mm_chr16_40586612_40587608
Length = 997
Score = 1106 bits (572), Expect = 0.0
Identities = 588/594 (98%)
Strand = Plus / Plus
Query: 4 ggaattcatgtgctgacttcatggtagaggtgatggctccctcaacctcactattccctt 63
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatgtgctgacttgatggtagaggtgatggctccctcaacctcactattccctt 263
Query: 64 tctcaagtttagctgctagaagaaatcttttatataacaccagataaacaacaaataatc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tctcaagtttagctgctagaagaaatcttttatataacaccagataaacaacaaataatc 323
Query: 124 tagccaggtctagttattcagcaaaatggggagtggagctaggtagatcctcagcaggta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tagccaggtctagttattcagcaaaatggggagtggagctaggtagatcctcagcaggta 383
Query: 184 agttggcttggttccagctttagggagactaaaggaagtactacagcctaaagctgaagg 243
||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 384 agttggcttggttccagctttagggaggctaaaggaagtacaacagcctaaagctgaagg 443
Query: 244 tcatcctgggacaccatagaacaatgacttatatgccaattaacccattgtaaattgaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcatcctgggacaccatagaacaatgacttatatgccaattaacccattgtaaattgaaa 503
Query: 304 tattgtcaagtatacattgcatctaaaatacccagctcacacatccctcatacagggatc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tattgtcaagtatacattgcatctaaaatacccagctcacacatccctcatacagggatc 563
Query: 364 tgttgtccttgacttgttcataatttatggtgcatctgagaaccatggatttcaccattt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgttgtccttgacttgttcataatttatggtgcatctgagaaccatggatttcaccattt 623
Query: 424 tctggtattagttagaacaatcatgatgatataattctcattaagaattactacttcatt 483
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 624 tctggtattagttagaacaatcatgacgatataattctcattaagaattactacttcatt 683
Query: 484 tccagccattatatttcactctctctgattcttcaggccttttctaccctttccatagtc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tccagccattatatttcactctctctgattcttcaggccttttctaccctttccatagtc 743
Query: 544 ctcaaatgtctagcccttggntgatgtgaggcagagganagggaaaaagggaag 597
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 744 ctcaaatgtctagcccttgggtgatgtgaggcagaggaaagggaaaaagggaag 797
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no418_k23.g1 MSMg01no418_k23.g1 CHROMAT_FILE:
MSMg01no418_k23.g1 PHD_FILE: MSMg01no418_k23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:57 2005
(492 letters)
>mm_chr16_40781527_40782419
Length = 893
Score = 915 bits (473), Expect = 0.0
Identities = 488/493 (98%), Gaps = 1/493 (0%)
Strand = Plus / Minus
Query: 1 acttcctaaagggctaacctcttcaggctgtcatgtgtatagataggttttcagtggaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 acttcctaaagggctaacctcttcaggctgtcatgtgtatagataggttttcagtggaag 634
Query: 61 aataagataggaacacagatatttcctccatagcactttctgacattttcgttcagttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 aataagataggaacacagatatttcctccatagcactttctgacattttcgttcagttat 574
Query: 121 ttcagtgtttgagatgtgtagttaaacactcatcatataatcgttttagaagcataaaaa 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ttcagtgtttgaaatgtgtagttaaacactcatcatataatcgttttagaagcataaaaa 514
Query: 181 tcaatctctatatagcatttaatgatttttgcttaatattctatttagtacaatgttaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tcaatctctatatagcatttaatgatttttgcttaatattctatttagtacaatgttaac 454
Query: 241 atttaataactagttctggttttttttttaagttttcagacaaaagaagtgactgtctac 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 atttaataactagttctcgttttttttttaagttttcagacaaaagaagtgactgtctac 394
Query: 301 tagaacatttcatcttttaaaaacacatttttacctcttaattattttgttcattcagtc 360
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tagaacacttcatcttttaaaaacacatttttacctcttaattattttgttcattcagtc 334
Query: 361 agtgg-aaaaaaatcccagataataatatgacttcgttctgaactgacatgaaaactaag 419
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 agtggaaaaaaaatcccagataataatatgacttcgttctgaactgacatgaaaactaag 274
Query: 420 ggccttaaaacattgaaagcatgaaagacagcatacagcatcgtctcaggcacacattaa 479
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 273 ggccttaaaacattgaaagcatgaaagacagcatacagcatcatctcaggcacacattaa 214
Query: 480 taaggaattcgta 492
|||||||||||||
Sbjct: 213 taaggaattcgta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 893
Length adjustment: 10
Effective length of query: 482
Effective length of database: 883
Effective search space: 425606
Effective search space used: 425606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
