Query= MSMg01no419_b21.b1 MSMg01no419_b21.b1 CHROMAT_FILE:
MSMg01no419_b21.b1 PHD_FILE: MSMg01no419_b21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:31 2005
(267 letters)
>mm_chr16_43536350_43537017
Length = 668
Score = 501 bits (259), Expect = e-146
Identities = 265/267 (99%), Gaps = 1/267 (0%)
Strand = Plus / Plus
Query: 2 tctctatagatttccagaaagggaacagcaattgagagcataatgttttgctcttgcagt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tctctatagatttccagaaagggaacagcaattgagagcataatgttttgctcttgcagt 261
Query: 62 cttatcagctaagtcaccagaaaattcatatttcacttcaaattcatatacagtaagtaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cttatcagctaagtcaccagaaaattcatatttcacttcaaattcatatacagtaagtaa 321
Query: 122 tatca-ctagaaattgttcataaagagaaacctcttgctttcttgttgtgtgttcctcac 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tatcaactagaaattgttcataaagagaaacctcttgctttcttgttgtgtgttcctcac 381
Query: 181 atgtcagactaaaatggcttttctaagctcttacagactactgcataaggtctactataa 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 382 atgtcagactaaaatggcttttctaagctcttacagattactgcataaggtctactataa 441
Query: 241 gccacaggtttatagatctttgatact 267
|||||||||||||||||||||||||||
Sbjct: 442 gccacaggtttatagatctttgatact 468
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 668
Length adjustment: 9
Effective length of query: 258
Effective length of database: 659
Effective search space: 170022
Effective search space used: 170022
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no419_b21.g1 MSMg01no419_b21.g1 CHROMAT_FILE:
MSMg01no419_b21.g1 PHD_FILE: MSMg01no419_b21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:31 2005
(243 letters)
>mm_chr16_43586314_43586956
Length = 643
Score = 379 bits (196), Expect = e-110
Identities = 202/204 (99%)
Strand = Plus / Minus
Query: 1 tctgaccccatgtgcatgcgttctcttctcagggagctcacagacctaagagagcttcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tctgaccccatgtgcatgcgttctcttctcagggagctcacagacctaagagagcttcac 325
Query: 61 tttctggaacagtggggtctaaggcctttgcatctaattttttctttccagtgggagggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttctggaacagtggggtctaaggcctttgcatctaattttttctttccagtgggagggg 265
Query: 121 gccaaaaatatccttgctgaaagtgcttataggaggcaggtgtgctggagaacatttatc 180
|||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gccagaaatatccttgccgaaagtgcttataggaggcaggtgtgctggagaacatttatc 205
Query: 181 aatactctctctctctctctctct 204
||||||||||||||||||||||||
Sbjct: 204 aatactctctctctctctctctct 181
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
