Query= MSMg01no424_f02.b1 MSMg01no424_f02.b1 CHROMAT_FILE:
MSMg01no424_f02.b1 PHD_FILE: MSMg01no424_f02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:15 2005
(551 letters)
>mm_chr16_35916357_35917307
Length = 951
Score = 938 bits (485), Expect = 0.0
Identities = 531/547 (97%), Gaps = 2/547 (0%)
Strand = Plus / Plus
Query: 5 gaattcagggactaccagggctacaaggagaaaccctgtctcaatcgtcccgaccccccc 64
|||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 207 gaattcagggacaaccagggctacaaggagaaaccctgtctcaatcgtcccaacccacc- 265
Query: 65 accccaaacccacatgacaaattataaaacttgattggtggaggccaaataggtacactt 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 -ccccaaacccacatgacaaattataaaacttgattggtggaggccaaataggtacactt 324
Query: 125 ttaaaaacacagggtgaaataagagagagaaagcagtgatgttagaggggagtcagagga 184
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 325 ttaaaaacacagggtgaaataagagagagaaagcagtgatgttagaggggaatcagagga 384
Query: 185 gcagcactggctgcccttctagaagacccaggttctcttctcagcacctacatggtagct 244
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 385 gcagcactggctgcccttctagaagacccaggttctcttcccagcacctacatggtagct 444
Query: 245 ccctgtactggctggttttgtgtgtcaacttgacataagctggagttctcacagagaaag 304
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 445 ccctgtactggctggttttgtgtgtcaacttgacagaagctggagttctcacagagaaag 504
Query: 305 gagcttcccttgaggaaatgcctccatgagatccagctgtaaggcattttctcaattagt 364
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gagcctcccttgaggaaatgcctccatgagatccagctgtaaggcattttctcaattagt 564
Query: 365 gatcatggggggagggattgtgggtgacaccatccctgagctggtagtcttgggttctat 424
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gatcatgggggaagggattgtgggtgacaccatccctgagctggtagtcttgggttctat 624
Query: 425 aagaaagcaagctgagcaagcgaggggaagcaaacaagtaagcagcacccctccatggct 484
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 625 aagaaagcaagctgagcaagcgaggggaagcaaacaagtaagcagcattcctccatagct 684
Query: 485 tctgcacccactcctgcccccaagttcctaccctgtgtgagttcatgtcccgacttcctg 544
|||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 685 tctgcacccactcctgcctccaagttcctaccctgtgtgagttcatgtcctgacttcctt 744
Query: 545 tggtgat 551
|||||||
Sbjct: 745 tggtgat 751
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_f02.g1 MSMg01no424_f02.g1 CHROMAT_FILE:
MSMg01no424_f02.g1 PHD_FILE: MSMg01no424_f02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:15 2005
(536 letters)
>mm_chr16_36077470_36078405
Length = 936
Score = 723 bits (374), Expect = 0.0
Identities = 380/382 (99%)
Strand = Plus / Minus
Query: 155 ttcatcagaggcttctttcgcatggatggcagttaatgcaaattcataactggtccaagt 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 ttcatcagaggcttctttcgcatggatggcagttaatgcaaattcataactggtccaagt 877
Query: 215 gctgagaagtgactattggttgcttggccctaaaatctctatcagtcacaccaaggctca 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 gctgagaagtgactattggttgcttggccctaaaatctctatcagtcacaccaaggctca 817
Query: 275 ggcaccacagagaagatggggggaagaatgtaaaaacccacgggtggagaggggtgcagc 334
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 816 ggcaccacagagaagatggggggaagaatgtaaaaacccacgggtggagaggggcgcagc 757
Query: 335 aagacaaagtctctggacatcatcaagacagaaaagagcaagaaaagaagagctcagagg 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 aagacaaagtctctggacatcatcaagacagaaaagagcaagaaaagaagagctcagagg 697
Query: 395 aagaggatgatgatgaatgtgtgttccgagtgctcttttcttgtcaataaagcatttaac 454
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 696 aagaggatgatgatgaatgtgtgttccgagtggtcttttcttgtcaataaagcatttaac 637
Query: 455 ctcctgtgtaaaactcattccttttaaggagaaacagtgaaatgtgaaactgtgagattt 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 ctcctgtgtaaaactcattccttttaaggagaaacagtgaaatgtgaaactgtgagattt 577
Query: 515 gtttttaagactttagaggtag 536
||||||||||||||||||||||
Sbjct: 576 gtttttaagactttagaggtag 555
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space: 487076
Effective search space used: 487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
