Query= MSMg01no424_l04.b1 MSMg01no424_l04.b1 CHROMAT_FILE:
MSMg01no424_l04.b1 PHD_FILE: MSMg01no424_l04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:43 2005
(641 letters)
>mm_chr16_81784864_81785904
Length = 1041
Score = 1133 bits (586), Expect = 0.0
Identities = 594/597 (99%)
Strand = Plus / Minus
Query: 45 gtatagttaaccttgtaacttcactcactcactccttcatgcattatacactaaaccaga 104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 gtatagttaaccttgtaacttcactcactcactccttcatgcattatacactaaaccaga 982
Query: 105 cattttatttctccgattttctcaaataaaattctacatagaaatttatatgaatcaatg 164
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981 cattttatttctccaattttctcaaataaaattctacatagaaatttatatgaatcaatg 922
Query: 165 attcgcaatactgttagaactgaaatgttagtattttcaattatcatttattaaattatt 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 attcgcaatactgttagaactgaaatgttagtattttcaattatcatttattaaattatt 862
Query: 225 aaaacagatatatttaatatctcaaagatagcaagagtgaggaaacgtcattcttttgtg 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 aaaacagatatatttaatatctcaaagatagcaagagtgaggaaacgtcattcttttgtg 802
Query: 285 ttttgcttacagaagacctggtgggctgataattttacaaatactaacaaagatgttttt 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttttgcttacagaagacctggtgggctgataattttacaaatactaacaaagatgttttt 742
Query: 345 tatcatcacaaatatgcacctacaatttttaaaaacgtgtgtttgtgtgtgttgtgagat 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tatcatcacaaatatgcacctacaatttttaaaaacgtgtgtttgtgtgtgttgtgagat 682
Query: 405 atgagcacacgtcatacttatggtaatatttctctttaggattatagtcactaggagata 464
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 681 atgagcacacgtcatacttatggtaatatttctctttaggattacagtcactaggagata 622
Query: 465 tgtttctgcgtatagaacaagttctcagaagatgctgaaggacagttttgtccacatcac 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtttctgcgtatagaacaagttctcagaagatgctgaaggacagttttgtccacatcac 562
Query: 525 tcagganaaacgactaacagtggagtcacattttggaatcagtagtataaagagtccttt 584
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcaggaaaaacgactaacagtggagtcacattttggaatcagtagtataaagagtccttt 502
Query: 585 atttcctttggacttaagaatgcacacttgtgaaaagctgagaatatgtgagtctca 641
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atttcctttggacttaagaatgcacacttgtgaaaagctgagaatatgtgagtctca 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space: 650561
Effective search space used: 650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_l04.g1 MSMg01no424_l04.g1 CHROMAT_FILE:
MSMg01no424_l04.g1 PHD_FILE: MSMg01no424_l04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:43 2005
(618 letters)
>mm_chr16_81612773_81613790
Length = 1018
Score = 1143 bits (591), Expect = 0.0
Identities = 612/619 (98%), Gaps = 1/619 (0%)
Strand = Plus / Plus
Query: 1 atggtagtttccgaatcacaatatcatcatataaatgtgcatacatgtttatgtctacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atggtagtttccgaatcacaatatcatcatataaatgtgcatacatgtttatgtctacat 260
Query: 61 tgaaaatacaaattataaataaataaaaccattgcataaaagtaaattggtagcatggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaaaatacaaattataaataaataaaaccattgcataaaagtaaattggtagcatggaa 320
Query: 121 actaatgaagatttagtcattatagttatgactgtacaaccttgaaaatatgaggtaatt 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 actaatgaagatttagtcattatagttacgactgtacaaccttgaaaatatgaggtaatt 380
Query: 181 ttgtacaatatgaaaattgtaagtagtaaatgtattgtttagacattattgaaagtctaa 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 ttgtacaatatgaaaattgtaagtagtaaatgtattgtttagtcattattgaaagtctaa 440
Query: 241 aaatatatttatataaaaatcatacacaaaatgaatattaaaatttaaccaggcttcctc 300
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 aaatatatttacataaaaatcatacacaaaatgaatattaaaatctaaccaggcttcctc 500
Query: 301 aatacttttgtaaagcttatttccaaaagagtaatcatttaataagagatttcatgttgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatacttttgtaaagcttatttccaaaagagtaatcatttaataagagatttcatgttgc 560
Query: 361 ctttggcttatcatgagcagagattcaatagtagcttagctatgggtttaaccaccaatg 420
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 561 ctttggcttatcatgagcagagattcattagtagcttagctatgggtttaaccaccaatg 620
Query: 421 atgtgtttttt-atcatttatttaaagtgagatatgtcaacaaagatagtaaaggctaat 479
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 621 atgtgtttttttatcatttatttaaagtgagatatgtcaacaaatatagtaaaggctaat 680
Query: 480 tgttaaattttcattaaaggatttttaatatattctcatattcatagaactcctcctaaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgttaaattttcattaaaggatttttaatatattctcatattcatagaactcctcctaaa 740
Query: 540 ttcctttctgctggttactggtagttgtttgcctaactgtcttcatttaaataaggagga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttcctttctgctggttactggtagttgtttgcctaactgtcttcatttaaataaggagga 800
Query: 600 atcctacctaagcttggaa 618
|||||||||||||||||||
Sbjct: 801 atcctacctaagcttggaa 819
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
