Query= MSMg01no425_n17.b1 MSMg01no425_n17.b1 CHROMAT_FILE:
MSMg01no425_n17.b1 PHD_FILE: MSMg01no425_n17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:11 2005
(612 letters)
>mm_chr16_6731930_6732941
Length = 1012
Score = 1172 bits (606), Expect = 0.0
Identities = 608/609 (99%)
Strand = Plus / Minus
Query: 4 ggaattcattactttaccccatatgccccattcttgcatctcttcctatatccaggtttt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 ggaattcattactttaccccatatgccccattcttgcatctcttcctatatccaggtttt 753
Query: 64 tataagaccgttatcaccttattctataagactgtgtttgtcctttattgtcatttcctc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 tataagaccgttatcaccttattctataagactgtgtttgtcctttattgtcatttcctc 693
Query: 124 agtcttcatctcctaggagatgctggctgtgtaattggcttcatcttgattctttcagcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 agtcttcatctcctaggagatgctggctgtgtaattggcttcatcttgattctttcagcc 633
Query: 184 ctaatttggctgcaagtacactttcctcagcctttcacctttagggttagtgaccataca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 ctaatttggctgcaagtacactttcctcagcctttcacctttagggttagtgaccataca 573
Query: 244 taactcatatatcaagcctagcacactggatatagtgtttctgaatcactgtcacagtac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 taactcatatatcaagcctagcacactggatatagtgtttctgaatcactgtcacagtac 513
Query: 304 cattcagtctctctttaggacctaatgtgtcatgtgagatgggattcataaacaaatcca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 cattcagtctctctttaggacctaatgtgtcatgtgagatgggattcataaacaaatcca 453
Query: 364 ttcttatgacacatggcaggtatggaggatggaaagagctcagctggtgagggagtgtac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ttcttatgacacatggcaggtatggaggatggaaagagctcagctggtgagggagtgtac 393
Query: 424 cctttgtggggatttctagcctacaggagatggaggcagtttactttcagaaagccctca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 cctttgtggggatttctagcctacaggagatggaggcagtttactttcagaaagccctca 333
Query: 484 gttcagtccctgtatgggaaaggaataatgtgttagagagtcaaggtatgattggggtat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gttcagtccctgtatgggaaaggaataatgtgttagagagtcaaggtatgattggggtat 273
Query: 544 tttaaaacactttcccttttaagctttggnttactttacctgtgtgtgtttagggcttat 603
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 272 tttaaaacactttcccttttaagctttggtttactttacctgtgtgtgtttagggcttat 213
Query: 604 gtgcgtact 612
|||||||||
Sbjct: 212 gtgcgtact 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space: 603204
Effective search space used: 603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_n17.g1 MSMg01no425_n17.g1 CHROMAT_FILE:
MSMg01no425_n17.g1 PHD_FILE: MSMg01no425_n17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:11 2005
(462 letters)
>mm_chr16_6553043_6553904
Length = 862
Score = 893 bits (462), Expect = 0.0
Identities = 462/462 (100%)
Strand = Plus / Plus
Query: 1 atgggtggcagtggtatcattggttaatgaagatcctggccatttatagaaagctgtcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgggtggcagtggtatcattggttaatgaagatcctggccatttatagaaagctgtcaa 260
Query: 61 aaagtcacaatgagaaatcttatattcaattccattgttctgtacctcaaagccatgata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaagtcacaatgagaaatcttatattcaattccattgttctgtacctcaaagccatgata 320
Query: 121 atggtcactattaaatacagtatcaaacattattgtgagagttataggctactgagttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggtcactattaaatacagtatcaaacattattgtgagagttataggctactgagttgg 380
Query: 181 aagctagcttaattaccatctatccagttactaatacttgctgaagaagagtgacacttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagctagcttaattaccatctatccagttactaatacttgctgaagaagagtgacacttg 440
Query: 241 gacttcagtaatgatgatcaggctccaccatatattgcatctcagtgttatcaagcttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacttcagtaatgatgatcaggctccaccatatattgcatctcagtgttatcaagcttgg 500
Query: 301 aatctggatatatctgtatttacaaaccccacagccattttatgatgatctaaaattgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatctggatatatctgtatttacaaaccccacagccattttatgatgatctaaaattgat 560
Query: 361 gtctgacaaacccttggttaagtagaatcattaatgctacaaatcaagaaaggacatatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtctgacaaacccttggttaagtagaatcattaatgctacaaatcaagaaaggacatatc 620
Query: 421 ttctaacccagatcctgagcaatgttctagattccctattcc 462
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttctaacccagatcctgagcaatgttctagattccctattcc 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
