Query= MSMg01no427_g24.b1 MSMg01no427_g24.b1 CHROMAT_FILE:
MSMg01no427_g24.b1 PHD_FILE: MSMg01no427_g24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:19 2005
(506 letters)
>mm_chr16_38184044_38184947
Length = 904
Score = 934 bits (483), Expect = 0.0
Identities = 500/507 (98%), Gaps = 4/507 (0%)
Strand = Plus / Minus
Query: 1 cttgctgtttttacaaggagtaaccagtgtcaatggggttgacacatcccaaccttaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 cttgctgtttttacaaggagtaaccagtgtcaatggggttgacacatcccaaccttaccc 645
Query: 61 atggctcacac-aaatgttctggaaactagaaggggttcgttccgtcgtcgtcacgtacc 119
||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 644 atggctcacacaaaatgttctggaaactagaaggggttcgttc---cgtcgtcacgtacc 588
Query: 120 ttgacatagatcacagggagcgtctgcttggctcgactatagtgtctggcgactctgtac 179
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 587 ttgacatagatcacagggagtgtctgcttggctcgactatagtgtctggcgactctgtac 528
Query: 180 actgtctccggaacatagtccagcaccaggttaaggtagacctcatctttctgtaaggtt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 actgtctccggaacatagtccagcaccaggttaaggtagacctcatctttctgtaaggtt 468
Query: 240 tttaagaacaaaagaacaaaaacagattagagactgatcttaggtattcaagtgagagca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tttaagaacaaaagaacaaaaacagattagagactgatcttaggtattcaagtgagagca 408
Query: 300 aattttctatacacctcttattcagatgtttaaagaaaagcttcatatggttaattttaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 aattttctatacacctcttattcagatgtttaaagaaaagcttcatatggttaattttaa 348
Query: 360 ttacacaaaattacttttgaacatgaatagagctgaacaaatgcacctaccatactttat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ttacacaaaattacttttgaacatgaatagagctgaacaaatgcacctaccatactttat 288
Query: 420 aatcccagtatagttaagagtcccatcatattgcttatactgtattatgatagcttatca 479
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 287 aatcccagtatagttaagagtcccatcatgttgcttatactgtgttatgatagcttatca 228
Query: 480 tttattataatgtttattattttttag 506
|||||||||||||||||||||||||||
Sbjct: 227 tttattataatgtttattattttttag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 904
Length adjustment: 10
Effective length of query: 496
Effective length of database: 894
Effective search space: 443424
Effective search space used: 443424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no427_g24.g1 MSMg01no427_g24.g1 CHROMAT_FILE:
MSMg01no427_g24.g1 PHD_FILE: MSMg01no427_g24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:19 2005
(356 letters)
>mm_chr16_38016902_38017657
Length = 756
Score = 681 bits (352), Expect = 0.0
Identities = 355/356 (99%)
Strand = Plus / Plus
Query: 1 aagtttgcccaagagaaccaatgaaagggtaaagctgttttcacccaggacactaaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagtttgcccaagagaaccaatgaaagggtaaagctgttttcacccaggacactaaaaaa 260
Query: 61 ggttcatagcctacagcagttcctggaactctctgagtcaaaggaaattatgtttccatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggttcatagcctacagcagttcctggaactctctgagtcaaaggaaattatgtttccatg 320
Query: 121 acacagagcctgactctgagtttcttaattaagggtatttgcatgatgagaggagacttg 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acacagagcctgactctgggtttcttaattaagggtatttgcatgatgagaggagacttg 380
Query: 181 tttcggaatagtcattgctctactactccctaatcaatggcccactgcttctgacctaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttcggaatagtcattgctctactactccctaatcaatggcccactgcttctgacctaag 440
Query: 241 aattatctctacggcaactccatgagtcatggagaaggcctggctctcaggaggggaggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aattatctctacggcaactccatgagtcatggagaaggcctggctctcaggaggggaggg 500
Query: 301 aacaccaggaaggagggaactgtaccttcagcctgagatctctcatcagggtgcag 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacaccaggaaggagggaactgtaccttcagcctgagatctctcatcagggtgcag 556
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 756
Length adjustment: 9
Effective length of query: 347
Effective length of database: 747
Effective search space: 259209
Effective search space used: 259209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
