Query= MSMg01no428_p10.b1 MSMg01no428_p10.b1 CHROMAT_FILE:
MSMg01no428_p10.b1 PHD_FILE: MSMg01no428_p10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:18 2005
(488 letters)
>mm_chr16_5574777_5575664
Length = 888
Score = 381 bits (197), Expect = e-110
Identities = 264/315 (83%), Gaps = 44/315 (13%)
Strand = Plus / Minus
Query: 218 ctgactgtggatgaccgtgaccagctgcatcatgttcaccatggctgccctgccttgaca 277
|||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 884 ctgattgtggatgaccatgaccagctgcatcatgttcaccatggctgccctgccatgaca 825
Query: 278 gactggaccctcaaactgctgtccttccttcc---------------------------- 309
||||||||||||||||||||||||||||||||
Sbjct: 824 gactggaccctcaaactgctgtccttccttccttccttccttccttccttccttccttcc 765
Query: 310 ----------------ttccttccgttgttgctccagtctgtcatattggcgtagcaatg 353
|||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 764 ttccttccttccttctttccttccattgttgctccagtctgtcataatggcgtagcaatg 705
Query: 354 agaaagtcactaatctacctggcctcccgagtgctggaactgttgcagaagctgctgtgc 413
||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 704 agaaagtcactaatccacctggcctccccagtgctggaactgttgcagaagctgctgtgc 645
Query: 414 cttgcttgtcattctaatttttttaaagaatcagattaggctgctggtctcctgtctttg 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 cttgcttgtcattctaatttttttaaagaatcagattaggctgctggtctcctgtctttg 585
Query: 474 agcatagtctgcttc 488
|||||||||||||||
Sbjct: 584 agcatagtctgcttc 570
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 888
Length adjustment: 10
Effective length of query: 478
Effective length of database: 878
Effective search space: 419684
Effective search space used: 419684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no428_p10.g1 MSMg01no428_p10.g1 CHROMAT_FILE:
MSMg01no428_p10.g1 PHD_FILE: MSMg01no428_p10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:18 2005
(541 letters)
>mm_chr16_5450790_5451729
Length = 940
Score = 926 bits (479), Expect = 0.0
Identities = 525/545 (96%), Gaps = 11/545 (2%)
Strand = Plus / Plus
Query: 1 ttatgtgataagaattggggtgtcacagggctggccctccagttggtgggagattaagtg 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttatgtgata-gaattggggtgtcacagggctggccctccagttggtgggagattaagtg 259
Query: 61 tgaggagcttaatcagggggctgagtctgaggtgattattaaatgtggtgattgggctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgaggagcttaatcagggggctgagtctgaggtgattattaaatgtggtgattgggctgt 319
Query: 121 gttctgcactttcttaacggctggatcatcctgacagcagggtcaccaccggtctctaac 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gttctgcactttcttcacggctggatcatcctgacagcagggtcaccaccggtctctaac 379
Query: 181 tcttctcattgactgtgttcaccagtcactggaaaaatcctctctctgaatgggtgtgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcttctcattgactgtgttcaccagtcactggaaaaatcctctctctgaatgggtgtgtg 439
Query: 241 atatatgtatatgtatacgtgcatgcacatgtgtatgtgtatgtgtgtgtgcacacactc 300
|| |||||||||||||||||||||||||||| ||||| ||||||| || | |||||
Sbjct: 440 at----gtatatgtatacgtgcatgcacatgtgtgtgtgt--gtgtgtgcgcgcgcactc 493
Query: 301 ----gtgtgtatgcatatggaggtcagaggacaagtttagcagtcgtttctcaaagtgtc 356
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 494 atgtgtgtgtatgcatatggaggtcagaggacaagtttagcagtcgtttctcaaagcgtc 553
Query: 357 atatatcatgttttgttttgcttcacgggggtctttccctgacctggaacttgcctggta 416
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 554 atataccatgttttgttttgcttcacaggggtctttccctgacctggaacttgcctggta 613
Query: 417 ggttaggctaactggataatgagccccagagccccatctgtacctgcctctccagctata 476
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 614 ggttaggctaactggataatgagccccagagccccacctgtacctgcctctccagctata 673
Query: 477 ggggttacaagagcctgccactatgcacagcttgattttttgtgtgggtgctgggggtca 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ggggttacaagagcctgccactatgcacagcttgattttttgtgtgggtgctgggggtca 733
Query: 537 aactc 541
|||||
Sbjct: 734 aactc 738
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 940
Length adjustment: 10
Effective length of query: 531
Effective length of database: 930
Effective search space: 493830
Effective search space used: 493830
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
