Query= MSMg01no428_p22.b1 MSMg01no428_p22.b1 CHROMAT_FILE:
MSMg01no428_p22.b1 PHD_FILE: MSMg01no428_p22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:20 2005
(495 letters)
>mm_chr16_75426968_75427862
Length = 895
Score = 895 bits (463), Expect = 0.0
Identities = 486/495 (98%), Gaps = 4/495 (0%)
Strand = Plus / Plus
Query: 1 gttgaggatttactgttataaatctagctgataaattacaagcccctggggttttcattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gttgaggatttactgttataaatctagctgataaattacaagcccctggggttttcattt 263
Query: 61 tatagggttatgaggatttgtacaagttggcttgggaagatccaggcagctcagtagctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tatagggttatgaggatttgtacaagttggcttgggaagatccaggcagctcagtagctg 323
Query: 121 actcgccacaggaactatggggtcaggtgagaccaccattgcaggcacatagccggcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 actcgccacaggaactatggggtcaggtgagaccaccattgcaggcacatagccggcttt 383
Query: 181 agcgtagattgatttttttttttataactacatactacatgatattattcatgtttgctt 240
|||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 384 agcgtagattga---ttttttttataactacatactatatgatattattcatgtttgctt 440
Query: 241 cttacatgtattttactggtaccctgctgagtaattcaatacatctgaaaaaaagtaatc 300
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttacatgtagtgtactggtaccctgctgagtaattcaatacatctgaaaaaaagtaatc 500
Query: 301 ttgtatatcattgaagacttgctaaatcagaacctctaggaggaagccttgaaatccgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgtatatcattgaagacttgctaaatcagaacctctaggaggaagccttgaaatccgta 560
Query: 361 ctataatgactccagtagatggtaactttccaatcttaagttaggaataatttataaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctataatgactccagtagatggtaactttccaatcttaagttaggaataatttataaaaa 620
Query: 421 aaatatgtaggttcataaaacctaggaacagacagattttaaagaaacagtactaatgaa 480
|| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 621 aa-tatgtaggttcataaaacctaggaacagacagattttaaagaaacagtcctaatgaa 679
Query: 481 agaaagatttttagt 495
||||| |||||||||
Sbjct: 680 agaaaaatttttagt 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space: 429225
Effective search space used: 429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no428_p22.g1 MSMg01no428_p22.g1 CHROMAT_FILE:
MSMg01no428_p22.g1 PHD_FILE: MSMg01no428_p22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:20 2005
(432 letters)
>mm_chr16_75606968_75607800
Length = 833
Score = 775 bits (401), Expect = 0.0
Identities = 425/433 (98%), Gaps = 1/433 (0%)
Strand = Plus / Minus
Query: 1 aaagtaaaactgacactttacagtatgtctgaaagctatttttaagaaaatga-aagtgg 59
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 633 aaagtaaaactgacactttacagtatgtctgaaagctatttttaagaaaatgataagtgg 574
Query: 60 ctaataaatttaaatatttcacaccaataaaataagtggaagaatgcagtttaatcttag 119
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 573 ctaataaatttaaatatttcacaccaataaaaaaagtggaagaatgcagtttaatcatag 514
Query: 120 taaaatgtgaaaagtttgttttaggaacttgcaaaagtgcagttttatgaaattgatcac 179
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 taaaatgttaaaagtttgttttaggaacttgcaaaagtgcagttttatgaaattgatcac 454
Query: 180 catgttatgactatgataactaaaatattgtaattttgtagtattgttataaagccagat 239
||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 453 tatgttataactatgataactaaaatattgtaatgttgtagtattgttataaagccagat 394
Query: 240 ctttaatgtgtgagaataaacagtatagaaaacacaaacaagagtttactatgtggtaga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ctttaatgtgtgagaataaacagtatagaaaacacaaacaagagtttactatgtggtaga 334
Query: 300 tgagttatttaaattaacaatgtgaagactaaaacaagatacatcctttaacttacatcc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tgagttatttaaattaacaatgtgaagactaaaacaagatacatcctttaacttacatcc 274
Query: 360 cataataacattaattttaagtattttgcatagtttactgtaaggatgaagcaaaacacc 419
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 273 cataataacattaattttaactattttgcatagtttactgtaaggatgaagcaaaacacc 214
Query: 420 aaaaggaaagctg 432
|||||||||||||
Sbjct: 213 aaaaggaaagctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 833
Length adjustment: 9
Effective length of query: 423
Effective length of database: 824
Effective search space: 348552
Effective search space used: 348552
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
