Query= MSMg01no430_j17.b1 MSMg01no430_j17.b1 CHROMAT_FILE:
MSMg01no430_j17.b1 PHD_FILE: MSMg01no430_j17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:32 2005
(377 letters)
>mm_chr16_29242176_29242952
Length = 777
Score = 675 bits (349), Expect = 0.0
Identities = 370/377 (98%)
Strand = Plus / Minus
Query: 1 tgattcatttcatcataattaattgcaaacaaacatattccttctcctttttaaacaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tgattcatttcatcataattaattgcaaacaaacatattccttctcctttttaaacaact 518
Query: 61 aaatatttacctatgttttctaatgaatgaaacccagaatgcaggacaatgatagacaat 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 517 aaatatttacctatgttttctaatgaatgaaacccagaatgcaggacaatgatagataat 458
Query: 121 attgcccaaaagtatatttataaacaacccttgtagaagctttcacttaaattgttttta 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 atcgcccaaaagtatatttataaacaacccttgtagaagctttcacttaaattgttttta 398
Query: 181 tatatactttgggctgttggtgaaatggtcttggaaagcttctatgatatgaagaaaata 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 aatatactttgggctgttggtgaaatggtcttggaaagcttctatgatatgaagaaaata 338
Query: 241 ctcctttttttgttttaatcaggagggattgtaacatccagtgtaggagacagatttcag 300
||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ctcctttgtttgcattaatcaggagggattgtaacatccagtgtaggagacagatttcag 278
Query: 301 caaatgccttcataccatctactaaataaatactattttgtgccttcttatctaatacta 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 277 caaatgccttcataccatctactaaataaatactattttgtgtcttcttatctaatacta 218
Query: 361 caggtgcgttatattaa 377
|||||||||||||||||
Sbjct: 217 caggtgcgttatattaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 777
Length adjustment: 9
Effective length of query: 368
Effective length of database: 768
Effective search space: 282624
Effective search space used: 282624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no430_j17.g1 MSMg01no430_j17.g1 CHROMAT_FILE:
MSMg01no430_j17.g1 PHD_FILE: MSMg01no430_j17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:32 2005
(306 letters)
>mm_chr16_29062209_29062915
Length = 707
Score = 563 bits (291), Expect = e-165
Identities = 303/307 (98%), Gaps = 1/307 (0%)
Strand = Plus / Plus
Query: 1 tttttttttttaattgtcaatttgcaggtcattgtggtacaggatcacttataccaagca 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 tttttttttttaattgtcaatttgcaggtcattgcggtacaggatcacttataccaagca 260
Query: 61 ttagtaggagcctcacctttatattcccatttcacacacataaaatactctttaatgtaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttagtaggagcctcacctttatattcccatttcacacacataaaatactctttaatgtaa 320
Query: 121 atagcttctcatgagcagagagctttgctattactaattttttccctcactgagggaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atagcttctcatgagcagagagctttgctattactaattttttccctcactgagggaagt 380
Query: 181 acccc-atgtgacctaacgtagtgatggcagtacatttgcatattgtttctttagttttt 239
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accccgatgtgacctaacgtagtgatggcagtacatttgcatattgtttctttagttttt 440
Query: 240 ccctgatgcttagctatacaaaccttcctttttctatgctgtggggagagatggctgact 299
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccctgatgcaaagctatacaaaccttcctttttctatgctgtggggagagatggctgact 500
Query: 300 ccagcaa 306
|||||||
Sbjct: 501 ccagcaa 507
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 306
Length of database: 707
Length adjustment: 9
Effective length of query: 297
Effective length of database: 698
Effective search space: 207306
Effective search space used: 207306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
