NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
ACAGGCCTATTCTGGGCATCTTCTGGAGCTCACTTAAAAAAGCTTACTCA
AACTCATACTCTTTCCCATAAAGTTGCCAGTATAGTTTCCATTCACCCAC
TCCACCTGAGAGTTGAAGGAAGTAGTCCTACAAAGTTTCAGGCCATATTT
GACTAGAGGTATCCATTCCATATAAACTGTGTCTAGAGCCTTTATCTCTT
CAAATTAAATTCATCCATTAGCTACATACCAAATAGCCTTTATAATTCCA
ACCACCTTTACGTTAAGCACACACTCTTGTTCTTTCCTTTAAAATACAAA
TAAGACAAGTAGGAAATGGAAAAAAAATGAATAAGAAGGAGGTCTAAACC
ATTCACCTCGATGAATGATAATTTCAATTGCTGGAAAAATACAGCATTAT
TGTTGAGTACTGAAAGCTTACTTGAAATCTGTGGTCATTAAGTTAAATGT
GGACTTGGTTTTTCTCCTATACAGTCTTCAGCACTTTGGACATAAATGAT
ATCAGCATTTAATAGGTTTTAAATCTGGTCTCATACATAAGAATAAAGTA
GCAAGGGGAGCAGAGGGGGTGGGGATCTATAAAAGGGAGTGGTTATGCTA
CAAATCACTCTGTCCCGGTGACAATAGAAACCCTGAGGAAATCGCGGAAT
GATGATTGATTTCCCGGCGGCTAACGCACCGG

ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCA
CCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAA
CAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAAT
TCAGGTGATAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCT
CCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCT
GGCAGTTCCTCAGAAAACTGGATATAGTACTACCGAAGGATCCAGCAATA
CCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACAC
ATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGA
AAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTAC
ATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAA
ATTTCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAA
TTATTTCTCTAAGGATCTCTCTCCATATGTATTCTCTGATAAGTGCACAT
TAGCCTAAATTCCTGTGAATTTTCGAACTTTTTTCCATTTCCCTATCTTT
GGTTACCTTTCACCTTTGATAACTGATTTTTG

Query= MSMg01no431_c01.b1 MSMg01no431_c01.b1 CHROMAT_FILE:
MSMg01no431_c01.b1 PHD_FILE: MSMg01no431_c01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:18 2005
         (579 letters)



>mm_chr16_40909654_40910631
          Length = 978

 Score = 1023 bits (529), Expect = 0.0
 Identities = 549/563 (97%), Gaps = 13/563 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   gggcatcttctggagctcacttaaaaaagcttactcaaactcatactctttcccataaag 60
           |||||||||||||||||||||||||||||||            |||||||||||||||||
Sbjct: 550 gggcatcttctggagctcacttaaaaaagct------------tactctttcccataaag 503

                                                                       
Query: 61  ttgccagtatagtttccattcacccactccacctgagagttgaaggaagtagtcctacaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ttgccagtatagtttccattcacccactccacctgagagttgaaggaagtagtcctacaa 443

                                                                       
Query: 121 agtttcaggccatatttgactagaggtatccattccatataaactgtgtctagagccttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 agtttcaggccatatttgactagaggtatccattccatataaactgtgtctagagccttt 383

                                                                       
Query: 181 atctcttcaaattaaattcatccattagctacataccaaatagcctttataattccaacc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 atctcttcaaattaaattcatccattagctacataccaaatagcctttataattccaacc 323

                                                                       
Query: 241 acctttacgttaagcacacactcttgttctttcctttaaaatacaaataagacaagtagg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 acctttacgttaagcacacactcttgttctttcctttaaaatacaaataagacaagtagg 263

                                                                       
Query: 301 aaatggaaaaaaaatgaataagaaggaggtctaaaccattcacctcgatgaatgataatt 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aaatgg-aaaaaaatgaataagaaggaggtctaaaccattcacctcgatgaatgataatt 204

                                                                       
Query: 361 tcaattgctggaaaaatacagcattattgttgagtactgaaagcttacttgaaatctgtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tcaattgctggaaaaatacagcattattgttgagtactgaaagcttacttgaaatctgtg 144

                                                                       
Query: 421 gtcattaagttaaatgtggacttggtttttctcctatacagtcttcagcactttggacat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 gtcattaagttaaatgtggacttggtttttctcctatacagtcttcagcactttggacat 84

                                                                       
Query: 481 aaatgatatcagcatttaataggttttaaatctggtctcatacataagaataaagtagca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83  aaatgatatcagcatttaataggttttaaatctggtctcatacataagaataaagtagca 24

                                  
Query: 541 aggggagcagagggggtggggat 563
           |||||||||| ||||||||||||
Sbjct: 23  aggggagcagtgggggtggggat 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 978
Length adjustment: 10
Effective length of query: 569
Effective length of database: 968
Effective search space:   550792
Effective search space used:   550792
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)