XXXXXXXXXXXXXXXXXXXXXXXXXTGTGCGNAAATCCGCGGAATTCTTT
GTTCATTCCCGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTGAAGT
CCTCCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATCTGAT
TTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTTTGTCTT
ATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTCCC
ATTTGTAGATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTCAGG
AATTTTTCCCCTGTGTTTATATCTTCAAGGCTTTTCCCCACTTTCTCCTC
TATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCACTTAG
ATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCATTCTTCTA
CACGATAACAACCAGTTGTCCCAGCACCAATTGGTTGAAAATGCTGTCTT
TCTTCCACTGGATGGNTTTAGCTCCCTTGTCCGAGATCAAGTGAACATAG
GTGGGGTGGGTTCTTTTCTGGAACTTCAATTCCATCCCATTGGGCCAATT
GGCCGGCCCCAAACCCGTACCATGGCAGTTTTTTTCCCAATTGTTCTCGA
AAAAAGTCTTTTTGTTGGGGATGGGGATCCCCCCCAAAATCTCTTTTTTT
CTTTGTAAAAATTATTTTTTCCTCAGGTTTTTTTGTTTTTCCCAAATATT
TTTGTTATGTTCGCCTCTCTCTCTCTTTAAAGAAAN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXTGGAGTACATAGTCTATCGTTGGAGGTTGCATGGTAGT
ATTTCAAAGGAATTCAAGGTAGAGACATACATAGCATAGGGAGTTTTAGA
AACAAAGCTATACTTTGTACATTAATGCTATTTATAAACAAATAATATAG
CTGCTTCTTTATTTAAAAGTGTGGATGGAAAATTCTTAATGAGGATAAGA
GATTATGACCCCACCCCTTGTTTATGTTTTCAAAATTTGTGAAAGGTAAT
AGTGAAATTTCAGTCTATCTTTCAGAAGCATTGAATATGAATTGATATTT
CAGTTCAAAGACAGAATTCCCAATCGAAAAAACATTATTTTTTTTTCTGG
TTCCTAATGTGTATAAGCAGTGCTTGGATTGCTCTATCAGTGCATAATCA
TTTAACCTGGTGTTCTTGGCAATCAGATTCAATAGCAGCACTAGATCAAA
TTTTATGCCATTAGAGAAGATACCCACAGGCAGTCATTCTGTCCATGGTT
ACAGAATCAGCATTACACAAAGCTCATATTTCACAGAGGAGAGTGGTGCT
CACCTCTGATCTCATGTCCTTATGTTTAACACCACTGAAATGCTGTTTTC
CATCAAGTGGCCCTGGAACCCCCAGTCCTCAGGGCCCAACTTTTTTACCA
TAAAACAGATCCAATTTTTTGTTTTCAAAAATAATCTAACTTACCCCCCT
TTTTTTTTTTTCCCCTCAAGTACTTCCACN

Query= MSMg01no431_c21.g1 MSMg01no431_c21.g1 CHROMAT_FILE:
MSMg01no431_c21.g1 PHD_FILE: MSMg01no431_c21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:22 2005
         (482 letters)



>mm_chr16_66637222_66638101
          Length = 880

 Score =  826 bits (427), Expect = 0.0
 Identities = 471/493 (95%), Gaps = 15/493 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   tggagtacatagtctatcgttggaggttgcatggtagtatttcaaaggaattcaaggtag 60
           |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggagtacatggcctatcgttggaggttgcatggtagtatttcaaaggaattcaaggtag 260

                                                                       
Query: 61  agacatacatagcatagggagttttagaaacaaagctatactttgtacattaatgctatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agacatacatagcatagggagttttagaaacaaagctatactttgtacattaatgctatt 320

                                                                       
Query: 121 tataaacaaataatatagctgcttctttatttaaaagtgtggatggaaaattcttaatga 180
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tataaacaaataatatagctgtttctttatttaaaagtgtggatggaaaattcttaatga 380

                                                                       
Query: 181 ggataagagattatgaccccaccccttgtttatgttttcaaaatttgtgaaaggtaatag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggataagagattatgaccccaccccttgtttatgttttcaaaatttgtgaaaggtaatag 440

                                                                       
Query: 241 tgaaatttcagtctatctttcagaagcattgaatatgaattgatatttcagttcaaagac 300
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 tgaaatttcagtctatctttcagaagcattgaatatgaattgatacttcagttcaaagac 500

                                                                       
Query: 301 agaattcccaatcgaaaaaacattatttttttttctggttcctaatgtgtataagcagtg 360
            |||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||
Sbjct: 501 tgaattcccaatcgaaaaa-cattatttttttt-ctggttcctaatgtctataagcagtg 558

                                                                       
Query: 361 cttggattgctctatcagtgcataatcatttaacctggtgttcttggcaatcagattcaa 420
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 cttggattactctatcagtgcataatcatttaacctggtgttcttggcaatcagattcaa 618

                                                                       
Query: 421 tagcagcactagatcaaattttatgccattaga-----------gaagatacccacaggc 469
           |||||||||||||||||||||||||  ||||||           ||||||||||||||||
Sbjct: 619 tagcagcactagatcaaattttatg--attagattaaaattagagaagatacccacaggc 676

                        
Query: 470 agtcattctgtcc 482
           |||||||||||||
Sbjct: 677 agtcattctgtcc 689


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 880
Length adjustment: 10
Effective length of query: 472
Effective length of database: 870
Effective search space:   410640
Effective search space used:   410640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)