Query= MSMg01no431_k15.b1 MSMg01no431_k15.b1 CHROMAT_FILE:
MSMg01no431_k15.b1 PHD_FILE: MSMg01no431_k15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:04 2005
(242 letters)
>mm_chr16_24992383_24993024
Length = 642
Score = 468 bits (242), Expect = e-136
Identities = 242/242 (100%)
Strand = Plus / Minus
Query: 1 gtgggggcttcatgttcttgcagcataactcgctctgagaggcattcccagtctcagagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gtgggggcttcatgttcttgcagcataactcgctctgagaggcattcccagtctcagagg 383
Query: 61 accatatggaaagcaactggtgaaaaaatgaatcacagtaactgggcttaaaaggaaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 accatatggaaagcaactggtgaaaaaatgaatcacagtaactgggcttaaaaggaaaca 323
Query: 121 gagatcatctgactccgaaagaattccacacagaggcaagttaagtggaatgagaagttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gagatcatctgactccgaaagaattccacacagaggcaagttaagtggaatgagaagttt 263
Query: 181 attggatttttaaatataaagtaattcttttacagaaaaaactgtgattttcatatttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 attggatttttaaatataaagtaattcttttacagaaaaaactgtgattttcatatttat 203
Query: 241 tc 242
||
Sbjct: 202 tc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no431_k15.g1 MSMg01no431_k15.g1 CHROMAT_FILE:
MSMg01no431_k15.g1 PHD_FILE: MSMg01no431_k15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:05 2005
(439 letters)
>mm_chr16_24827834_24828671
Length = 838
Score = 833 bits (431), Expect = 0.0
Identities = 437/439 (99%), Gaps = 1/439 (0%)
Strand = Plus / Plus
Query: 1 atctgaaaaggtagatataattcagaatgaagcttgtgtggaatgctagctctgttgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctgaaaaggtagatataattcagaatgaagcttgtgtggaatgctagctctgttgctt 260
Query: 61 gttttatgatcgttacagctacttgattactttggggaaatgaaatgtagaaagattgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttttatgatcgttacagctacttgattactttggggaaatgaaatgtagaaagattgga 320
Query: 121 tgagcaaaggaagagacaggttaacacagttttctaccttaatgtttgttgggactcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgagcaaaggaagagacaggttaacacagttttctaccttaatgtttgttgggactcagt 380
Query: 181 gaatttcggctgcctggctcatcccttgatgcctcaggattgggaggagtaaaggttgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaatttcggctgcctggctcatcccttgatgcctcaggattgggaggagtaaaggttgag 440
Query: 241 atctgacatctagtttggataagcagcagaccctgtctctgcttggtcaatacttataat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atctgacatctagtttggataagcagcagaccctgtctctgcttggtcaatacttataat 500
Query: 301 ctaggctgtaaggtaagagccagggaaaggcttgggctctgccccctcaatcccaggaat 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 ctaggctgtaaggtaagagccagggaaaggcttgggctctgcccc-tcaatcccaggaat 559
Query: 361 ccactaagcacacgtcagaaccaaagtcaaaagaaaatgatgaaatttactctctggcca 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctactaagcacacgtcagaaccaaagtcaaaagaaaatgatgaaatttactctctggcca 619
Query: 421 aaatgctattatttcactg 439
|||||||||||||||||||
Sbjct: 620 aaatgctattatttcactg 638
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 838
Length adjustment: 9
Effective length of query: 430
Effective length of database: 829
Effective search space: 356470
Effective search space used: 356470
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
