MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-431M08
Chromosome	16 (Build37)
Map Location	49,763,341 - 49,763,622
singlet/doublet	singlet
Overlap gene	Ift57
Upstream gene	Trat1, Retnlb, Retnla, Retnlg, 2310047C04Rik, C330027C09Rik, Myh15, 1700026J12Rik, LOC386061, EG216818, LOC628903
Downstream gene	LOC667796, LOC100043767, Cd47, EG433024, LOC100043769, LOC628951, EG224180, EG667802, LOC100043404, Bbx, LOC100043414, Ccdc54, LOC672778, 5330426P16Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Trat1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77647 MGI:1924897
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Retnlb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57263 MGI:1888505
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Retnla (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57262 MGI:1888504
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Retnlg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245195 MGI:2667763
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310047C04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224170 MGI:1917433
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C330027C09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224171 MGI:2146335
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Myh15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667772 MGI:3643515
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins

name	1700026J12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73255 MGI:1920505
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 2 Proteins

name	LOC386061 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:386061
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	EG216818 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216818 MGI:3647922
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 10 Proteins

name	LOC628903 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:628903
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Ift57 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73916 MGI:1921166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667796 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667796
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100043767 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043767
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Cd47 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16423 MGI:96617
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG433024 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433024 MGI:3647871
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100043769 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043769
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC628951 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:628951
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG224180 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224180 MGI:3646707
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667802 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667802 MGI:3647096
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 22 Proteins pseudo : _no_value

name	LOC100043404 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043404
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Bbx (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70508 MGI:1917758
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043414 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043414
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Ccdc54 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69339 MGI:1916589
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC672778 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:672778
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 70 Proteins pseudo : _no_value

name	5330426P16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68190 MGI:1915440
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 29 ESTs

name	Trat1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:79750337 GeneID:77647 MGI:1924897
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T cell receptor associated transmembrane adaptor 1 transcript_id : NM_198297.2

name	Retnlb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802460 GeneID:57263 MGI:1888505
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : resistin like beta transcript_id : NM_023881.3

name	Retnla (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:103472021 GeneID:57262 MGI:1888504
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : resistin like alpha transcript_id : NM_020509.3

name	Retnlg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361567 GeneID:245195 MGI:2667763
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : resistin like gamma transcript_id : NM_181596.3

name	2310047C04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124249053 GeneID:224170 MGI:1917433
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310047C04 gene transcript_id : NM_027341.1

name	C330027C09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125858490 GeneID:224171 MGI:2146335
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C330027C09 gene transcript_id : NM_172616.2

name	Myh15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149267422 GeneID:667772 MGI:3643515
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins product : myosin, heavy chain 15 transcript_id : XM_992311.2

name	EG216818 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149267426 GeneID:216818 MGI:3647922
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 10 Proteins product : predicted gene, EG216818 transcript_id : XM_126432.6

name	Ift57 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373257 GeneID:73916 MGI:1921166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : intraflagellar transport 57 homolog (Chlamydomonas) transcript_id : NM_028680.3

name	LOC100043767 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149267546 GeneID:100043767
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043767 transcript_id : XM_001481107.1

name	Cd47 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982429 GeneID:16423 MGI:96617
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD47 antigen (Rh-related antigen, integrin-associated signal transducer) transcript_id : NM_010581.3

name	LOC100043769 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149267548 GeneID:100043769
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043769 transcript_id : XM_001481109.1

name	LOC628951 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149267550 GeneID:628951
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC628951 transcript_id : XM_001481110.1

name	LOC100043404 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149267430 GeneID:100043404
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : similar to ribosomal protein transcript_id : XM_001480094.1

name	Bbx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802692 GeneID:70508 MGI:1917758
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bobby sox homolog (Drosophila) transcript_id : NM_027444.2

name	LOC100043414 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149267433 GeneID:100043414
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : hypothetical protein LOC100043414 transcript_id : XM_001480110.1

name	Ccdc54 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801673 GeneID:69339 MGI:1916589
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 54 transcript_id : NM_027046.3

name	5330426P16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149267438 GeneID:68190 MGI:1915440
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 29 ESTs product : RIKEN cDNA 5330426P16 gene transcript_id : XM_992800.2

name	Trat1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:79750338 GeneID:77647 MGI:1924897
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS]; GO:0042101 - T cell receptor complex [Evidence ISS] GO_process : GO:0006955 - immune response [Evidence IEA]; GO:0001920 - negative regulation of receptor recycling [Evidence ISS]; GO:0051051 - negative regulation of transport [Evidence ISS]; GO:0050850 - positive regulation of calcium-mediated signaling [Evidence ISS]; GO:0050862 - positive regulation of T cell receptor signaling pathway [Evidence ISS] codon_start : 1 note : T cell receptor interacting molecule; T-cell receptor interacting molecule product : T cell receptor associated transmembrane adaptor 1 protein_id : NP_938039.2

name	Retnlb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328327 CCDS:CCDS28210.1 GeneID:57263 MGI:1888505
definition	GO_component : GO:0005576 - extracellular region [Evidence IDA] GO_function : GO:0005179 - hormone activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : found in inflammatory zone 2; resistin-like molecule beta product : resistin like beta protein_id : NP_076370.2

name	Retnla (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:103472022 GeneID:57262 MGI:1888504
definition	GO_component : GO:0005576 - extracellular region [Evidence IDA] GO_function : GO:0005179 - hormone activity [Evidence IEA] codon_start : 1 note : hypoxia-induced mitogenic factor; found in inflammatory zone 1 product : resistin like alpha protein_id : NP_065255.2

name	Retnlg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31711999 GeneID:245195 MGI:2667763
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005179 - hormone activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : RELMgamma; resistin-like molecule gamma product : resistin-like gamma protein_id : NP_853627.1

name	2310047C04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249054 GeneID:224170 MGI:1917433
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : E3 ubiquitin-protein ligase DZIP3 protein_id : NP_081617.1

name	C330027C09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125858491 GeneID:224171 MGI:2146335
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC224171 protein_id : NP_766204.2

name	Myh15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149267423 GeneID:667772 MGI:3643515
definition	codon_start : 1 product : similar to hCG1811516 protein_id : XP_997405.2

name	EG216818 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149267427 GeneID:216818 MGI:3647922
definition	codon_start : 1 product : similar to ubiquitin A-52 residue ribosomal protein fusion product 1 protein_id : XP_126432.5

name	Ift57 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560071 CCDS:CCDS28211.1 GeneID:73916 MGI:1921166
definition	GO_component : GO:0019861 - flagellum [Evidence IEA]; GO:0005794 - Golgi apparatus [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0006915 - apoptosis [Evidence ISS]; GO:0006919 - caspase activation [Evidence ISS]; GO:0042981 - regulation of apoptosis [Evidence ISS] codon_start : 1 note : Vestrogen-related receptor beta like 1; estrogen-related receptor beta like 1; intraflagellar transport protein 57 product : huntingtin-interacting protein-1 protein interactor protein_id : NP_082956.2

name	LOC100043767 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149267547 GeneID:100043767
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481157.1

name	Cd47 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754382 CCDS:CCDS28212.1 GeneID:16423 MGI:96617
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0008228 - opsonization [Evidence IDA]; GO:0050766 - positive regulation of phagocytosis [Evidence IDA] codon_start : 1 note : Rh-related antigen; integrin-associated protein product : CD47 antigen protein_id : NP_034711.1

name	LOC100043769 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149267549 GeneID:100043769
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481159.1

name	LOC628951 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149267551 GeneID:628951
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481160.1

name	LOC100043404 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149267431 GeneID:100043404
definition	codon_start : 1 product : similar to ribosomal protein protein_id : XP_001480144.1

name	Bbx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18378727 GeneID:70508 MGI:1917758
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : HMG-BOX transcription factor BBX protein_id : NP_081720.1

name	LOC100043414 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149267434 GeneID:100043414
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480160.1

name	Ccdc54 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312272 CCDS:CCDS28214.1 GeneID:69339 MGI:1916589
definition	codon_start : 1 product : testes development-related NYD-SP17 protein_id : NP_081322.1

name	5330426P16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149267439 GeneID:68190 MGI:1915440
definition	codon_start : 1 product : hypothetical protein LOC68190 protein_id : XP_997894.2

name	LOC386061 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:386061
definition	number : 5 pseudo : _no_value

name	LOC386061 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:386061
definition	number : 4 pseudo : _no_value

name	LOC386061 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:386061
definition	number : 3 pseudo : _no_value

name	LOC386061 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:386061
definition	number : 2 pseudo : _no_value

name	LOC386061 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:386061
definition	number : 1 pseudo : _no_value

name	LOC628903 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:628903
definition	number : 1 pseudo : _no_value

name	LOC628903 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:628903
definition	number : 2 pseudo : _no_value

name	LOC628903 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:628903
definition	number : 3 pseudo : _no_value

name	LOC628903 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:628903
definition	number : 4 pseudo : _no_value

name	LOC628903 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:628903
definition	number : 5 pseudo : _no_value

name	LOC667796 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667796
definition	number : 1 pseudo : _no_value

name	1700026J12Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149267424 GeneID:73255 MGI:1920505
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 2 Proteins product : RIKEN cDNA 1700026J12 gene transcript_id : XR_034525.1

name	EG433024 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149267429 GeneID:433024 MGI:3647871
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG433024 transcript_id : XR_002319.2

name	EG224180 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149267264 GeneID:224180 MGI:3646707
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG224180 transcript_id : XR_035106.1

name	EG667802 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149267552 GeneID:667802 MGI:3647096
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 22 Proteins product : predicted gene, EG667802 pseudo : _no_value transcript_id : XR_002080.2

name	LOC672778 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149267436 GeneID:672778
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 70 Proteins product : similar to protease (prosome, macropain) 26S subunit, ATPase 1 pseudo : _no_value transcript_id : XR_034545.1

clone name	MSMg01-424G03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-377A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323I18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-423G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122N24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-153A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222I22
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-431M08.T7 (MSMg01no431_m08.b1)	MSMg01-431M08.TJ (MSMg01no431_m08.g1)
ACC	AG523952	AG523953
length	1,640	786
length of high quality (start - end)	---	282 (69 - 350)
definition	CHROMAT_FILE: MSMg01no431_m08.b1 PHD_FILE: MSMg01no431_m08.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:55:14 2005	CHROMAT_FILE: MSMg01no431_m08.g1 PHD_FILE: MSMg01no431_m08.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:55:14 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	ACGAGACACACACGTATAGCCTATTTTGTCAGACGTGCAAGCTGTAAATC CTTATCACTATATATACATTCTCTNCTATTCTATTCTCGCCTGACGTCCT ACTTCTCTCATTATNATCTCAAATAATCCTCTATCATGATGGTGTGGCAT AGTCTGACTGCTCATCACGCTGTATCTCTGACCATGACCAATGATGCGAC TACTGTAATCTATATACGCACGATCAGCGCGACGCGCCACGCTATATCGC TTGATACTATCGATGCATCTTTCTCATCCACCGCTCCGGAGTATCTATAC TGCACTCATTATTATCTACTATGCGTCTAATATCGCGGCGAATGTCGAAT TATGTCATCTGTACGACGCGAATTGCGTCAGAAGATTAGATAAACGTTAG TGCGATTCGACNACTCGGTCATGCTTGCGTCATATATGTATCACGCGAAC GTGTCTCGTACTCTACGGCTATAGCTCTACATTATCTCGTCAATCGTCAG CACACGCGTCTATAACCATCTTGCTGTCCTGCTAATATACTCTANCTAAC ACTACATAACTNATATACACGGAATACGTAGTGTAGGATCTAATCAGGCG CACGTGCGCGACGACATATGCCGCACACCGCAGATATTAGAAGTCGCGCA TTCATCGAGACAGTTATCCTTCGTCCAACTACCACAGCTACACTACGTTC GCGCGTCTNTATGCATATAGCGTCATGGACGTCCTCCACTCATAGATCGC CATTAGCTTACTCGTACAGTAAGACGCACACAGAAGCCCCGACGCGACCG CATTAATCTCACGCTGTATCTGTATAATATCTGTGTATGAGATAAATAAT ATATCGCGAGCGCTCATCTCTCACATACTGATNACGTAGCGNCGTTANAA TTNAGTCACAGATAATATACTCTGCTATAATATCCCACAGGCTGTGCCAT ATCTGGTAGTAGTGGTCGACATCATATATCAACGATCGCAGTGTCATCAC CGTGCCTGCGATCTCGTATAAGAGCTTGTACTGAGATCTGCGACCACCAT ATCTCGTCTAGTCATCTCATGCATATATACTCGCCGCTCACTCCACGTTA TATATTCACCTACATACTCTATATCTCCACGCTCACACGCGCACGAATAT TACTCGCTGTGCCTGTGACTAACCGTCTCGATTTCGCATCGCTACATGTA TCGACTGACACTTCTCGTGCTGCATANACTAATATGATTCGTGGTCGGTA TGACTATGTCGCGCAGTTCTGTAATACTGTATAACTATATACCAACTATA TCTACCGCTCCTATGACTCGACTAGCGTACGACGTCGTCTATCAGCGGCG TACGTTCTCTGCGCTCACATCATCGCGCGCATGCTCGAAGATATTCGCTA TAGCTGCACAGCTAATCTCCGACATCATATGTGCTATTCTCATATTACCA NATATGCGCTAGTACCGCTATATATGCTACACCACGCAACACGCACGTAC TTCTCATCTACACCGTGATATTATTTCGCAGGCATTCGTTCACTCCTNCT CTACCATGCGTCTGTTGATGTATNTGTCTATTCTCGATACGCAGCNGTTG AGTGCAGTGTCGCACAAGATCATTATACGTATATTGTATN	CATGTGCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXATCTCTCAGCAATTATCCCCCATTACGAATCA TCCAGTTTGACCAGGCTAGTGGTCATCACCTCTGGCTTGTATTTCAGAAA GATCATCTAGGGTTCTAATGCTCTGCACACAGCCTGGCAATCTAAAGTGG GATGTGGGGATTTTCTTGAAATGTCTCAATGGGTTCATTATTTGGATCTC AAATGCATCTTTCTTTCCTCTCTAGCTATTCTATTCTCTGTTCCTGTAGA CAAACCTTTGTTGAATTCTTCCTTAAATACCCACTTAGCACTTCTTTTCC TAGAAAAGTTAGAAAATTTAGCCTCAGTACATCAAACATTGAACCAGTTC CCATCCTAAAACTCCCAGGTGTTTAAAATACCACCGCATATCTGTGTGTA ATGTATTCTGCCATTGGCTGTGCTTTAACTCCTATTTCTGTTTCAATACA TACCTATTATTTTGTTTTCCCTTTTTCCTGCCCTTCTTATCTCTTTAACC ATTTTTTTTTTTTTTTTTTCCTTCTTTTCCCCCCCTCCTTCTCTCCTAAC TATTTTCTCTTCTTCCCTTCCTCCTCACATTTTCCCTTATTTCTTTTTCT TATCTCTTCCCTCTCCCTTTCTTCTTCACACCCTTTTATTTCTTTCACAC ACTTCCCTCTCTCCTTCTTACTCCCTTTCTTACTTCCCTTTTTCTCTTAT ACCTTTACCCTACTTCTATTCCTCCCTCTCTATTCN
quality values	Open. Hide. 10 10 10 10 10 10 8 8 8 8 8 8 6 6 6 6 6 6 8 9 9 10 10 9 9 9 11 11 6 6 6 6 6 6 6 6 8 6 6 8 8 8 9 10 10 8 10 10 8 8 9 10 10 10 8 8 8 8 8 6 6 6 6 7 10 10 10 11 9 10 11 9 9 3 0 3 6 6 6 8 8 8 10 7 8 6 6 6 6 8 8 8 8 8 8 9 9 13 8 8 6 6 6 6 8 8 6 6 6 6 6 8 8 3 0 3 6 8 8 9 9 9 9 8 10 7 6 8 8 8 8 9 8 8 6 6 6 6 6 6 6 8 8 7 7 7 7 8 10 8 8 6 6 8 6 9 9 9 9 11 10 10 6 6 6 6 6 11 12 11 11 10 8 8 8 7 7 7 8 8 8 8 8 8 6 6 6 6 8 8 8 8 8 11 11 11 11 11 12 9 9 8 8 8 8 6 7 7 6 6 6 13 13 15 11 11 11 11 11 8 8 6 6 8 6 9 9 12 12 11 11 11 11 11 10 10 10 6 6 6 8 8 9 10 10 10 8 6 6 6 8 10 8 6 6 8 8 8 8 7 6 8 8 6 6 6 8 6 8 8 8 8 8 8 6 6 6 8 8 10 10 10 11 9 11 9 6 8 6 6 6 6 6 6 8 8 6 6 6 6 6 6 8 8 8 6 6 6 6 10 6 9 8 10 8 6 6 6 6 6 8 6 8 6 6 6 8 8 8 6 6 6 7 8 7 8 9 10 9 6 6 6 6 6 8 8 8 8 8 9 9 11 11 11 11 8 8 8 6 6 8 8 10 10 9 9 9 12 11 11 11 10 9 8 8 7 6 6 6 6 8 8 6 6 7 6 8 8 8 8 8 6 7 6 7 7 10 10 10 10 10 8 8 8 8 8 8 8 10 10 3 0 3 8 10 8 8 8 8 8 8 8 10 10 10 10 10 6 6 6 6 6 8 10 9 10 9 10 10 9 11 8 10 10 8 7 7 8 8 11 8 9 9 9 9 12 11 8 8 6 6 8 8 9 9 10 10 10 10 10 10 12 6 6 8 8 8 8 10 8 8 8 8 6 6 8 8 6 6 6 6 8 8 12 8 8 6 8 8 6 6 6 6 6 6 6 6 6 8 8 10 8 6 6 6 6 6 6 6 6 8 9 12 8 8 6 6 7 7 12 10 10 6 6 6 6 10 7 7 7 9 11 13 3 0 3 8 8 6 6 10 8 9 9 9 9 10 8 6 6 3 0 3 10 10 10 10 10 9 10 6 6 6 8 8 10 10 8 8 10 10 11 6 8 6 6 6 6 8 8 6 6 8 10 6 6 6 6 6 8 8 8 8 10 8 9 9 6 6 6 6 7 9 10 8 10 8 7 7 7 8 10 9 8 10 10 8 8 8 6 6 8 8 8 10 8 8 8 8 8 6 6 6 9 6 6 8 8 6 6 6 6 7 6 6 6 6 8 8 6 6 6 6 8 6 6 6 8 12 10 11 6 6 6 6 6 8 8 8 8 8 6 6 6 6 8 8 8 8 8 8 8 8 10 9 8 8 8 8 8 10 12 12 12 12 12 15 3 0 3 6 6 6 8 10 10 10 12 16 10 8 6 6 8 8 6 6 6 6 6 6 8 8 8 10 11 11 14 12 11 10 10 9 10 11 11 11 9 6 8 6 6 6 6 8 8 9 9 10 10 10 10 8 8 6 6 8 8 8 6 6 6 8 8 8 7 7 8 7 8 10 8 8 8 8 8 8 8 8 8 7 6 6 8 6 6 6 6 8 8 10 8 9 8 8 8 8 8 6 6 6 6 8 8 9 9 9 9 8 8 8 8 8 8 13 15 10 8 6 6 6 6 8 8 10 9 9 8 6 6 6 10 9 9 9 10 15 9 8 8 8 8 8 8 8 8 8 8 8 10 10 8 8 8 8 8 8 8 8 9 9 9 9 10 10 10 10 10 8 8 8 3 0 3 6 6 6 6 6 6 3 0 3 6 6 6 3 0 3 6 8 3 0 3 6 6 6 6 8 8 8 8 6 8 6 6 10 10 7 6 6 6 6 6 6 6 10 10 7 6 6 6 6 8 8 9 7 6 6 6 6 6 6 6 8 6 6 6 6 6 6 6 6 6 6 8 8 6 6 8 6 6 6 6 6 6 8 10 9 8 8 8 8 8 8 8 8 10 8 6 6 7 6 6 6 9 6 6 6 6 8 8 8 8 8 8 8 8 8 6 6 6 6 9 6 8 8 8 8 8 8 6 8 8 8 8 10 8 6 6 8 6 6 6 6 8 6 6 8 6 6 8 8 10 8 8 6 6 6 6 8 8 8 8 6 6 6 8 10 9 9 9 8 8 8 8 8 8 6 6 6 6 6 6 8 14 17 11 8 8 8 8 9 9 11 11 12 13 11 8 6 8 6 6 6 6 9 7 7 8 8 8 8 8 6 6 6 6 8 8 15 21 10 10 8 8 6 7 10 7 10 10 10 7 6 6 6 6 6 8 8 8 8 8 10 10 9 8 10 9 11 10 10 6 6 6 10 9 8 8 8 8 6 6 7 7 10 10 15 7 7 7 6 8 6 8 8 8 8 7 8 8 8 6 6 6 10 8 8 8 8 6 6 6 6 8 8 8 8 8 8 15 15 15 8 8 6 6 6 8 10 6 8 6 7 7 8 8 8 8 8 8 10 8 8 6 6 8 8 15 11 8 7 7 6 8 10 6 6 6 8 9 9 12 9 3 0 3 10 10 10 10 9 9 9 9 9 9 10 6 6 6 6 6 10 8 8 8 8 10 13 15 13 13 8 8 6 6 8 8 9 9 10 6 6 6 6 8 8 6 6 6 10 10 6 6 6 6 6 6 8 10 8 9 8 8 8 8 8 11 10 10 6 6 6 6 10 8 8 8 8 8 6 6 6 7 12 10 8 8 8 8 8 9 9 9 11 11 9 9 9 12 10 9 9 9 9 9 14 11 14 19 19 11 10 10 8 8 8 8 9 10 10 10 10 8 8 8 8 7 8 7 7 8 8 10 8 8 8 8 9 10 11 11 11 11 12 10 6 6 6 6 6 6 8 6 8 8 10 10 15 10 8 8 8 8 6 8 6 8 8 15 13 9 9 9 6 6 7 10 8 6 6 6 8 6 6 6 6 6 6 11 10 9 9 9 12 10 7 6 6 6 6 8 8 10 10 10 10 8 8 8 6 6 6 6 6 8 6 6 6 8 8 7 6 7 6 8 6 3 0 3 8 8 8 10 13 12 8 8 8 8 8 13 8 8 8 8 8 10 8 8 8 8 8 8 8 8 6 6 6 6 6 6 6 6 6 8 6 6 6 6 8 8 8 8 8 9 11 16 17 10 11 9 9 9 8 8 8 8 8 8 10 8 8 8 8 8 8 6 6 6 6 6 7 8 9 9 9 9 9 8 8 10 7 7 6 6 8 8 8 8 8 8 10 11 3 0 3 10 10 10 9 7 8 6 6 8 8 8 8 8 6 6 6 6 6 6 6 6 6 6 3 0 3 10 8 8 9 10 9 9 10 6 6 7 7 12 11 9 9 6 6 6 3 0 3 6 6 6 6 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 6 6 6 8 8 8 8 10 9 8 10 8 8 8 8 8 8 8 3 0	Open. Hide. 6 6 6 8 6 7 7 7 8 8 14 24 31 39 39 36 34 34 39 37 37 32 28 34 27 25 9 9 9 9 10 9 9 11 16 22 22 32 32 39 27 25 12 12 11 23 26 50 50 50 42 33 27 20 10 10 11 12 14 13 16 25 19 28 28 28 31 30 47 47 53 57 36 36 37 36 36 40 47 57 57 53 53 53 53 53 68 68 68 68 68 68 68 68 68 68 51 51 50 50 50 50 50 50 50 51 68 68 68 57 57 57 57 47 47 59 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 57 57 59 57 57 68 68 57 57 57 57 57 57 59 50 48 46 46 46 48 57 68 68 68 57 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 59 59 59 59 59 59 57 57 68 68 68 68 68 68 68 68 68 57 57 50 50 50 50 50 50 57 57 57 50 50 50 51 50 50 68 68 68 59 59 57 57 57 57 57 57 57 57 57 57 57 47 43 43 35 35 35 44 44 68 68 68 68 57 57 57 57 68 57 57 42 43 37 37 37 48 48 57 57 57 57 59 68 68 68 68 68 68 68 68 68 59 59 59 48 48 48 48 48 57 57 54 54 54 59 59 57 57 57 59 59 59 59 59 59 47 47 39 43 43 47 47 47 47 47 50 48 50 48 44 40 39 32 24 22 10 10 8 8 8 8 8 8 13 20 29 30 39 47 35 39 37 39 39 39 37 27 28 14 14 28 28 43 48 48 57 57 37 37 25 25 16 21 12 14 15 24 19 10 10 10 10 10 12 18 24 28 32 27 22 27 20 20 20 24 34 37 33 30 30 28 25 23 28 28 30 33 36 28 21 24 24 21 18 18 15 27 19 25 25 28 28 28 30 31 37 47 30 21 12 11 11 16 15 15 9 9 10 9 9 9 25 19 30 22 22 8 8 8 8 8 11 12 13 19 18 16 15 8 8 8 8 8 8 10 11 11 8 8 6 7 8 8 10 10 10 8 8 6 6 8 8 8 8 8 8 10 15 16 19 19 15 13 10 10 10 10 10 10 13 10 13 10 10 8 8 8 15 17 14 14 15 15 10 8 8 8 8 8 11 10 10 10 8 8 8 10 10 10 10 10 12 18 11 12 8 8 11 11 15 15 10 11 11 25 12 12 8 8 8 8 8 8 8 9 10 19 13 13 11 10 8 10 10 10 12 12 8 8 6 6 8 8 9 11 19 17 28 25 20 19 17 16 12 14 10 16 11 10 12 10 8 8 8 8 8 8 8 8 19 12 16 13 12 12 10 9 9 9 9 10 14 16 10 10 9 10 10 10 8 6 8 8 8 8 17 17 20 16 16 10 10 11 13 13 11 8 8 8 8 8 8 9 11 11 9 8 8 6 6 6 6 8 9 10 8 8 8 8 6 6 8 10 8 8 7 10 10 19 17 13 11 10 11 8 10 6 6 8 8 10 17 10 11 11 11 10 8 8 8 8 10 10 7 7 7 6 8 8 8 8 8 8 8 10 17 7 13 7 9 9 14 12 12 10 10 10 8 8 8 8 9 9 9 10 14 17 14 18 15 12 12 10 10 10 10 8 10 10 9 9 9 8 10 11 9 22 15 15 9 7 10 8 6 6 8 8 10 10 12 11 8 8 12 13 13 8 8 8 8 8 10 11 11 16 16 9 9 9 8 9 10 10 8 8 10 6 6 8 8 11 6 8 7 7 13 9 10 8 8 8 8 9 9 11 12 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no431_m08.g1 MSMg01no431_m08.g1 CHROMAT_FILE:
MSMg01no431_m08.g1 PHD_FILE: MSMg01no431_m08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:14 2005
         (282 letters)



>mm_chr16_49763141_49763822
          Length = 682

 Score =  476 bits (246), Expect = e-139
 Identities = 273/282 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   atctctcagcaattatcccccattacgaatcatccagtttgaccaggctagtggtcatca 60
           |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 atctctcagcaattatcctccattacgaaccatccagtttgaccaggctagtggtcatca 260

                                                                       
Query: 61  cctctggcttgtatttcagaaagatcatctagggttctaatgctctgcacacagcctggc 120
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 cctctggcttgtatttcagaaagatcatccagggttctaatgctctgcacacagcctggc 320

                                                                       
Query: 121 aatctaaagtgggatgtggggattttcttgaaatgtctcaatgggttcattatttggatc 180
           |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 321 aatctaaagtgggatgtggggattttcttgcagtgtctcaatgggttcattatttggatc 380

                                                                       
Query: 181 tcaaatgcatctttctttcctctctagctattctattctctgttcctgtagacaaacctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 381 tcaaatgcatctttctttcctctctagctattctattctctgttcctgtagacaaacctg 440

                                                     
Query: 241 tgttgaattcttccttaaatacccacttagcacttcttttcc 282
           |||||||  | |||||||||||||||||||||||||||||||
Sbjct: 441 tgttgaacacatccttaaatacccacttagcacttcttttcc 482


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space:   183729
Effective search space used:   183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information